RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 DNTTP04053 509 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 CD48P09326 243 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 OR56A5P0C7T3 313 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 FCGR1AP12314 374 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 RPL17P18621 184 aaKnown RBP10.97□□□□□ -0.65
COPA-201ENST00000241704 SOAT1P35610 550 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 DAOAP59103 153 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 PEX6Q13608 980 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 INSCQ1MX18 579 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 B3GNT9Q6UX72 402 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 MAMDC4Q6UXC1 1216 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 DSELQ8IZU8 1212 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 SFRP1Q8N474 314 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 CPA6Q8N4T0 437 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 KREMEN2Q8NCW0 462 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 BTN2A3PQ96KV6 586 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 SLC9A7Q96T83 725 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 RNF39Q9H2S5 420 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 ATP13A3Q9H7F0 1226 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 CDHR5Q9HBB8 845 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 PNPOQ9NVS9 261 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 VPS51Q9UID3 782 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 GABRQQ9UN88 632 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 APODP05090 189 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 PTPN2P17706 415 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 IVDP26440 423 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 HTR1BP28222 390 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 GABRB2P47870 512 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 IST1P53990 364 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 TP53BP2Q13625 1128 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 TCEAL1Q15170 157 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 TEX44Q53QW1 395 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 VARS2Q5ST30 1063 aaKnown RBP10.97□□□□□ -0.65
COPA-201ENST00000241704 METTL3Q86U44 580 aaKnown RBP10.97□□□□□ -0.65
COPA-201ENST00000241704 ACMSDQ8TDX5 336 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 DCAKDQ8WVC6 231 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 SEMA3CQ99985 751 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 C16orf70Q9BSU1 422 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 MAN1C1Q9NR34 630 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 CLDND1Q9NY35 253 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 MPP6Q9NZW5 540 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 IGKV6D-21A0A0A0MT36 114 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 AVILO75366 819 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 HTR7P34969 479 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 RFX3P48380 749 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 TGM3Q08188 693 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 SIX1Q15475 284 aaPredicted RBP10.97□□□□□ -0.65
COPA-201ENST00000241704 CPT1BQ92523 772 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 TWNKQ96RR1 684 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 CGREF1Q99674 301 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 ACTR8Q9H981 624 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 TEKT2Q9UIF3 430 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 MLNP12872 115 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 KCNE1P15382 129 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 TPSB2P20231 275 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 GPC1P35052 558 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 MYBPC1Q00872 1141 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 TRIM25Q14258 630 aaKnown RBP10.97□□□□□ -0.65
COPA-201ENST00000241704 TPSAB1Q15661 275 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 TRIM60Q495X7 471 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 TIGD5Q53EQ6 642 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 FNBP1LQ5T0N5 605 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 ING5Q8WYH8 240 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 NDOR1Q9UHB4 597 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 SDK1Q7Z5N4 2213 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 EVPLLA8MZ36 301 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 FAM25AB3EWG3 89 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 FAM25CB3EWG5 89 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 FAM25GB3EWG6 89 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 SOCS7O14512 581 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 TPP1O14773 563 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 MSI1O43347 362 aaKnown RBP10.96□□□□□ -0.65
COPA-201ENST00000241704 PCSK6P29122 969 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 L1CAMP32004 1257 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 CRHR1P34998 444 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 FCHO2Q0JRZ9 810 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 LDLRAP1Q5SW96 308 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 GDF6Q6KF10 455 aaPredicted RBP10.96□□□□□ -0.65
COPA-201ENST00000241704 CNKSR3Q6P9H4 555 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 ZNF438Q7Z4V0 828 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 IFNEQ86WN2 208 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 ZDHHC14Q8IZN3 488 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 NETO2Q8NC67 525 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 FLCNQ8NFG4 579 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 TRUB1Q8WWH5 349 aaKnown RBP10.96□□□□□ -0.65
COPA-201ENST00000241704 MLPHQ9BV36 600 aaPredicted RBP10.96□□□□□ -0.65
COPA-201ENST00000241704 TPK1Q9H3S4 243 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 ARHGEF4Q9NR80 690 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.96□□□□□ -0.659e-10■■■□□ 18.7
COPA-201ENST00000241704 CLUHO75153 1309 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 MFSD11O43934 449 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 SNAP91O60641 907 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 BMP10O95393 424 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 RPN2P04844 631 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 SMIM18P0DKX4 95 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 SCNN1AP37088 669 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 MTX3Q5HYI7 312 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 EMID1Q96A84 441 aaPredicted RBP10.96□□□□□ -0.65
COPA-201ENST00000241704 PHF21BQ96EK2 531 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 PPP1R10Q96QC0 940 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms