RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 CERCAMQ5T4B2 595 aa20.55■□□□□ 0.88
SNX3-201ENST00000230085 NXNQ6DKJ4 435 aa20.55■□□□□ 0.88
SNX3-201ENST00000230085 LRRTM3Q86VH5 581 aa20.55■□□□□ 0.88
SNX3-201ENST00000230085 ZNF354CQ86Y25 554 aa20.55■□□□□ 0.88
SNX3-201ENST00000230085 AGR3Q8TD06 166 aa20.55■□□□□ 0.88
SNX3-201ENST00000230085 KCTD4Q8WVF5 259 aa20.55■□□□□ 0.88
SNX3-201ENST00000230085 ATXN7L3BQ96GX2 97 aa20.55■□□□□ 0.88
SNX3-201ENST00000230085 EML4Q9HC35 981 aaKnown RBP20.55■□□□□ 0.88
SNX3-201ENST00000230085 ABCD2Q9UBJ2 740 aa20.55■□□□□ 0.88
SNX3-201ENST00000230085 CNOT6Q9ULM6 557 aaKnown RBP20.55■□□□□ 0.88
SNX3-201ENST00000230085 PRORSD1PA6NEY8 169 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 OR6C75A6NL08 312 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 F5H423 210 aaPredicted RBP20.54■□□□□ 0.88
SNX3-201ENST00000230085 PSMD12O00232 456 aaPredicted RBP20.54■□□□□ 0.88
SNX3-201ENST00000230085 ADH1AP07327 375 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 GABRB3P28472 473 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 MSX2P35548 267 aaPredicted RBP20.54■□□□□ 0.88
SNX3-201ENST00000230085 CREMQ03060 361 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 SLC14A2Q15849 920 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 DUS1LQ6P1R4 473 aaKnown RBP20.54■□□□□ 0.88
SNX3-201ENST00000230085 PRMT9Q6P2P2 845 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 PKN3Q6P5Z2 889 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 KIAA0408Q6ZU52 694 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 GPR141Q7Z602 305 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 GALNT7Q86SF2 657 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 OR2T34Q8NGX1 318 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 OR2T3Q8NH03 318 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 SLC29A1Q99808 456 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 LPIN3Q9BQK8 851 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 CEP41Q9BYV8 373 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 IGFLR1Q9H665 355 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 CHRAC1Q9NRG0 131 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 TMEM9Q9P0T7 183 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 KCNK1O00180 336 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 AKAP10O43572 662 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 AHSGP02765 367 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 CPB1P15086 417 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 FOSL2P15408 326 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 STMN1P16949 149 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 NMBRP28336 390 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 PCSK1P29120 753 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 COG7P83436 770 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 MPP1Q00013 466 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 PFKPQ01813 784 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 POU4F1Q01851 419 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 HYAL1Q12794 435 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 RAB33AQ14088 237 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 FASTKQ14296 549 aaKnown RBP20.54■□□□□ 0.88
SNX3-201ENST00000230085 PRPSAP1Q14558 356 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 CYTH1Q15438 398 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 DUSP6Q16828 381 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 MTX3Q5HYI7 312 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 GK5Q6ZS86 529 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 CAMK1DQ8IU85 385 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 RNF148Q8N7C7 305 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 SCYL1Q96KG9 808 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 TNIP3Q96KP6 325 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 GPATCH1Q9BRR8 931 aaKnown RBP20.54■□□□□ 0.88
SNX3-201ENST00000230085 DUSP16Q9BY84 665 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 MUC13Q9H3R2 512 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 CROTQ9UKG9 612 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 SH3GLB1Q9Y371 365 aa20.54■□□□□ 0.88
SNX3-201ENST00000230085 A0A1B0GTW7 788 aa20.53■□□□□ 0.88
SNX3-201ENST00000230085 MYBPHLA2RUH7 354 aa20.53■□□□□ 0.88
SNX3-201ENST00000230085 TGM5O43548 720 aa20.53■□□□□ 0.88
SNX3-201ENST00000230085 COQ9O75208 318 aa20.53■□□□□ 0.88
SNX3-201ENST00000230085 HSD17B1P14061 328 aa20.53■□□□□ 0.88
SNX3-201ENST00000230085 CCR10P46092 362 aa20.53■□□□□ 0.88
SNX3-201ENST00000230085 ARCN1P48444 511 aaKnown RBP20.53■□□□□ 0.88
SNX3-201ENST00000230085 CLCN4P51793 760 aa20.53■□□□□ 0.88
SNX3-201ENST00000230085 NRF1Q16656 503 aa20.53■□□□□ 0.88
SNX3-201ENST00000230085 SLC39A12Q504Y0 691 aa20.53■□□□□ 0.88
SNX3-201ENST00000230085 COQ5Q5HYK3 327 aa20.53■□□□□ 0.88
SNX3-201ENST00000230085 RNF19BQ6ZMZ0 732 aa20.53■□□□□ 0.88
SNX3-201ENST00000230085 ZBTB49Q6ZSB9 765 aa20.53■□□□□ 0.88
SNX3-201ENST00000230085 TXNDC5Q8NBS9 432 aaKnown RBP20.53■□□□□ 0.88
SNX3-201ENST00000230085 ZNF461Q8TAF7 563 aa20.53■□□□□ 0.88
SNX3-201ENST00000230085 ADAM32Q8TC27 787 aa20.53■□□□□ 0.88
SNX3-201ENST00000230085 TMIGD2Q96BF3 282 aa20.53■□□□□ 0.88
SNX3-201ENST00000230085 ISOC1Q96CN7 298 aa20.53■□□□□ 0.88
SNX3-201ENST00000230085 ZNF512Q96ME7 567 aaPredicted RBP20.53■□□□□ 0.88
SNX3-201ENST00000230085 PGLYRP2Q96PD5 576 aa20.53■□□□□ 0.88
SNX3-201ENST00000230085 TRIM15Q9C019 465 aa20.53■□□□□ 0.88
SNX3-201ENST00000230085 WDR6Q9NNW5 1121 aaKnown RBP20.53■□□□□ 0.88
SNX3-201ENST00000230085 CRTAC1Q9NQ79 661 aa20.53■□□□□ 0.88
SNX3-201ENST00000230085 TMLHEQ9NVH6 421 aa20.53■□□□□ 0.88
SNX3-201ENST00000230085 CDH9Q9ULB4 789 aa20.53■□□□□ 0.88
SNX3-201ENST00000230085 KANSL1LA0AUZ9 987 aa20.52■□□□□ 0.88
SNX3-201ENST00000230085 UBDO15205 165 aa20.52■□□□□ 0.88
SNX3-201ENST00000230085 PHGDHO43175 533 aaKnown RBP20.52■□□□□ 0.88
SNX3-201ENST00000230085 NRP2O60462 931 aa20.52■□□□□ 0.88
SNX3-201ENST00000230085 USP12O75317 370 aa20.52■□□□□ 0.88
SNX3-201ENST00000230085 DCKP27707 260 aa20.52■□□□□ 0.88
SNX3-201ENST00000230085 SCNN1BP51168 640 aa20.52■□□□□ 0.88
SNX3-201ENST00000230085 TSPY1Q01534 308 aa20.52■□□□□ 0.88
SNX3-201ENST00000230085 BNIP2Q12982 314 aa20.52■□□□□ 0.88
SNX3-201ENST00000230085 CCDC85BQ15834 202 aaPredicted RBP20.52■□□□□ 0.88
SNX3-201ENST00000230085 DCAF6Q58WW2 860 aa20.52■□□□□ 0.88
SNX3-201ENST00000230085 TRIM67Q6ZTA4 783 aa20.52■□□□□ 0.88
SNX3-201ENST00000230085 PATL1Q86TB9 770 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms