RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 KLF1Q13351 362 aaPredicted RBP18.02■□□□□ 0.48
PFN1-201ENST00000225655 PERM1Q5SV97 790 aa18.02■□□□□ 0.48
PFN1-201ENST00000225655 DARS2Q6PI48 645 aaKnown RBP18.02■□□□□ 0.48
PFN1-201ENST00000225655 PAF1Q8N7H5 531 aa18.02■□□□□ 0.48
PFN1-201ENST00000225655 ARL10Q8N8L6 244 aa18.02■□□□□ 0.48
PFN1-201ENST00000225655 WDR48Q8TAF3 677 aa18.02■□□□□ 0.48
PFN1-201ENST00000225655 NSMCE3Q96MG7 304 aa18.02■□□□□ 0.48
PFN1-201ENST00000225655 WDR92Q96MX6 357 aa18.02■□□□□ 0.48
PFN1-201ENST00000225655 QKIQ96PU8 341 aaKnown RBP eCLIP18.02■□□□□ 0.483e-9■■■□□ 18.3
PFN1-201ENST00000225655 LGMNQ99538 433 aa18.02■□□□□ 0.48
PFN1-201ENST00000225655 POLR1BQ9H9Y6 1135 aa18.02■□□□□ 0.48
PFN1-201ENST00000225655 SEPT10Q9P0V9 454 aa18.02■□□□□ 0.48
PFN1-201ENST00000225655 PADI4Q9UM07 663 aa18.02■□□□□ 0.48
PFN1-201ENST00000225655 DOLKQ9UPQ8 538 aa18.02■□□□□ 0.48
PFN1-201ENST00000225655 SAR1BQ9Y6B6 198 aa18.02■□□□□ 0.48
PFN1-201ENST00000225655 DGKBQ9Y6T7 804 aa18.02■□□□□ 0.48
PFN1-201ENST00000225655 HTRA2O43464 458 aaPredicted RBP18.01■□□□□ 0.47
PFN1-201ENST00000225655 SOCS5O75159 536 aa18.01■□□□□ 0.47
PFN1-201ENST00000225655 CTSEP14091 401 aa18.01■□□□□ 0.47
PFN1-201ENST00000225655 CES1P23141 567 aa18.01■□□□□ 0.47
PFN1-201ENST00000225655 KIAA1024LP59773 190 aa18.01■□□□□ 0.47
PFN1-201ENST00000225655 ERVPABLB-1P60509 514 aa18.01■□□□□ 0.47
PFN1-201ENST00000225655 COL9A2Q14055 689 aaPredicted RBP18.01■□□□□ 0.47
PFN1-201ENST00000225655 PRKD1Q15139 912 aaPredicted RBP18.01■□□□□ 0.47
PFN1-201ENST00000225655 RBM44Q6ZP01 1051 aaKnown RBP18.01■□□□□ 0.47
PFN1-201ENST00000225655 GKN2Q86XP6 184 aa18.01■□□□□ 0.47
PFN1-201ENST00000225655 PLA2G15Q8NCC3 412 aa18.01■□□□□ 0.47
PFN1-201ENST00000225655 HIC2Q96JB3 615 aa18.01■□□□□ 0.47
PFN1-201ENST00000225655 C16orf45Q96MC5 204 aaPredicted RBP18.01■□□□□ 0.47
PFN1-201ENST00000225655 VAT1Q99536 393 aa18.01■□□□□ 0.47
PFN1-201ENST00000225655 PRORYQ9H606 182 aa18.01■□□□□ 0.47
PFN1-201ENST00000225655 RBM22Q9NW64 420 aaKnown RBP eCLIP18.01■□□□□ 0.473e-20■■■■■ 33.6
PFN1-201ENST00000225655 TTC7AQ9ULT0 858 aaPredicted RBP18.01■□□□□ 0.47
PFN1-201ENST00000225655 PTPRQQ9UMZ3 2332 aa18.01■□□□□ 0.47
PFN1-201ENST00000225655 A0A1W2PQ67 120 aa18■□□□□ 0.47
PFN1-201ENST00000225655 CACNB4O00305 520 aaPredicted RBP18■□□□□ 0.47
PFN1-201ENST00000225655 HOXC4P09017 264 aaPredicted RBP18■□□□□ 0.47
PFN1-201ENST00000225655 RBP3P10745 1247 aa18■□□□□ 0.47
PFN1-201ENST00000225655 GM2AP17900 193 aa18■□□□□ 0.47
PFN1-201ENST00000225655 CR2P20023 1033 aa18■□□□□ 0.47
PFN1-201ENST00000225655 PCBP4P57723 403 aaKnown RBP18■□□□□ 0.47
PFN1-201ENST00000225655 IFI35P80217 286 aaPredicted RBP18■□□□□ 0.47
PFN1-201ENST00000225655 ITKQ08881 620 aa18■□□□□ 0.47
PFN1-201ENST00000225655 RALGPS1Q5JS13 557 aa18■□□□□ 0.47
PFN1-201ENST00000225655 PAPD7Q5XG87 772 aaKnown RBP18■□□□□ 0.47
PFN1-201ENST00000225655 IGF2-ASQ6U949 168 aa18■□□□□ 0.47
PFN1-201ENST00000225655 CRTC1Q6UUV9 634 aa18■□□□□ 0.47
PFN1-201ENST00000225655 SYT10Q6XYQ8 523 aa18■□□□□ 0.47
PFN1-201ENST00000225655 RD3Q7Z3Z2 195 aa18■□□□□ 0.47
PFN1-201ENST00000225655 PGBD5Q8N414 524 aa18■□□□□ 0.47
PFN1-201ENST00000225655 ZNF248Q8NDW4 579 aa18■□□□□ 0.47
PFN1-201ENST00000225655 HTR3CQ8WXA8 447 aa18■□□□□ 0.47
PFN1-201ENST00000225655 MAML1Q92585 1016 aa18■□□□□ 0.47
PFN1-201ENST00000225655 FUBP1Q96AE4 644 aaKnown RBP18■□□□□ 0.47
PFN1-201ENST00000225655 PDXPQ96GD0 296 aa18■□□□□ 0.47
PFN1-201ENST00000225655 NUDCD1Q96RS6 583 aa18■□□□□ 0.47
PFN1-201ENST00000225655 RBM15Q96T37 977 aaKnown RBP eCLIP18■□□□□ 0.47
PFN1-201ENST00000225655 CCDC3Q9BQI4 270 aa18■□□□□ 0.47
PFN1-201ENST00000225655 MGME1Q9BQP7 344 aa18■□□□□ 0.47
PFN1-201ENST00000225655 HERPUD2Q9BSE4 406 aa18■□□□□ 0.47
PFN1-201ENST00000225655 POLR1EQ9GZS1 481 aaKnown RBP18■□□□□ 0.47
PFN1-201ENST00000225655 TTLL3Q9Y4R7 772 aa18■□□□□ 0.47
PFN1-201ENST00000225655 ENTPD2Q9Y5L3 495 aa18■□□□□ 0.47
PFN1-201ENST00000225655 SHROOM3Q8TF72 1996 aa18■□□□□ 0.47
PFN1-201ENST00000225655 KCNK1O00180 336 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 TNFP01375 233 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 KELP23276 732 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 TRIM23P36406 574 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 PAFAH1B1P43034 410 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 TLE3Q04726 772 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 KCTD16Q68DU8 428 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 NYAP1Q6ZVC0 841 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 RASGEF1CQ8N431 466 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 TEX26Q8N6G2 289 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 KYQ8NBH2 561 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 OR56A4Q8NGH8 313 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 ACTRT1Q8TDG2 376 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 ATXN7L3BQ96GX2 97 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 BBC3Q96PG8 261 aaPredicted RBP17.99■□□□□ 0.47
PFN1-201ENST00000225655 NOD2Q9HC29 1040 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 NT5MQ9NPB1 228 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 ASCL3Q9NQ33 180 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.99■□□□□ 0.47
PFN1-201ENST00000225655 GULP1Q9UBP9 304 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 RNF14Q9UBS8 474 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 B4GALT6Q9UBX8 382 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 GPR34Q9UPC5 381 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 SATB2Q9UPW6 733 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 RAI2Q9Y5P3 530 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 BAHCC1Q9P281 2608 aa17.99■□□□□ 0.47
PFN1-201ENST00000225655 A0A1W2PNU3 283 aaPredicted RBP17.98■□□□□ 0.47
PFN1-201ENST00000225655 TTC24A2A3L6 582 aaPredicted RBP17.98■□□□□ 0.47
PFN1-201ENST00000225655 TMEM202A6NGA9 273 aa17.98■□□□□ 0.47
PFN1-201ENST00000225655 A8MX80 341 aa17.98■□□□□ 0.47
PFN1-201ENST00000225655 TNFRSF10CO14798 259 aa17.98■□□□□ 0.47
PFN1-201ENST00000225655 JCHAINP01591 159 aa17.98■□□□□ 0.47
PFN1-201ENST00000225655 CA4P22748 312 aa17.98■□□□□ 0.47
PFN1-201ENST00000225655 NFKBIAP25963 317 aa17.98■□□□□ 0.47
PFN1-201ENST00000225655 ACOX1Q15067 660 aa17.98■□□□□ 0.47
PFN1-201ENST00000225655 ITPRIPL1Q6GPH6 555 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms