RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 ZFRQ96KR1 1074 aaKnown RBP22.17■■□□□ 1.14
CCDC9-201ENST00000221922 TBATAQ96M53 351 aa22.17■■□□□ 1.14
CCDC9-201ENST00000221922 ZNF512Q96ME7 567 aaPredicted RBP22.17■■□□□ 1.14
CCDC9-201ENST00000221922 MRPS26Q9BYN8 205 aaKnown RBP22.17■■□□□ 1.14
CCDC9-201ENST00000221922 TNFRSF12AQ9NP84 129 aa22.17■■□□□ 1.14
CCDC9-201ENST00000221922 CACNA2D2Q9NY47 1150 aa22.17■■□□□ 1.14
CCDC9-201ENST00000221922 MARCH4Q9P2E8 410 aaPredicted RBP22.17■■□□□ 1.14
CCDC9-201ENST00000221922 SEPT3Q9UH03 358 aa22.17■■□□□ 1.14
CCDC9-201ENST00000221922 H0YJX3 145 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 MUSKO15146 869 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 TRIM24O15164 1050 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 CD3EAPO15446 510 aaKnown RBP22.16■■□□□ 1.14
CCDC9-201ENST00000221922 OR6B1O95007 311 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 NDST3O95803 873 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 ETS2P15036 469 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 OGNP20774 298 aaKnown RBP22.16■■□□□ 1.14
CCDC9-201ENST00000221922 SLC6A4P31645 630 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 CDKN2DP55273 166 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 CDH4P55283 916 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 C1QTNF8P60827 252 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 HECTD3Q5T447 861 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 SLC39A5Q6ZMH5 540 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 CUZD1Q86UP6 607 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 FAM156AQ8NDB6 213 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 PLD4Q96BZ4 506 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 MGME1Q9BQP7 344 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 CYP4F12Q9HCS2 524 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 TRPC7Q9HCX4 862 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 KCTD3Q9Y597 815 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 E7ENX8 843 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 PSMD12O00232 456 aaPredicted RBP22.16■■□□□ 1.14
CCDC9-201ENST00000221922 FBP2O00757 339 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 UBDO15205 165 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 HMGA1P17096 107 aaKnown RBP22.16■■□□□ 1.14
CCDC9-201ENST00000221922 ATXN3P54252 364 aaPredicted RBP22.16■■□□□ 1.14
CCDC9-201ENST00000221922 CDKL1Q00532 357 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 KIAA1841Q6NSI8 718 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 LDB1Q86U70 411 aaPredicted RBP22.16■■□□□ 1.14
CCDC9-201ENST00000221922 ANKRD49Q8WVL7 239 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 DNAJC1Q96KC8 554 aaKnown RBP22.16■■□□□ 1.14
CCDC9-201ENST00000221922 CNBD2Q96M20 576 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 TOX2Q96NM4 488 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 CLSTN3Q9BQT9 956 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 SLC2A11Q9BYW1 496 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 NACA2Q9H009 215 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 POPDC3Q9HBV1 291 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 HACD3Q9P035 362 aa22.16■■□□□ 1.14
CCDC9-201ENST00000221922 OR51F1A6NGY5 319 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 CCL22O00626 93 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 ABLIM3O94929 683 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 GOT2P00505 430 aaKnown RBP22.15■■□□□ 1.14
CCDC9-201ENST00000221922 MYCP01106 439 aaPredicted RBP22.15■■□□□ 1.14
CCDC9-201ENST00000221922 ZNF26P17031 533 aaPredicted RBP22.15■■□□□ 1.14
CCDC9-201ENST00000221922 TCN1P20061 433 aaPredicted RBP22.15■■□□□ 1.14
CCDC9-201ENST00000221922 FDXRP22570 491 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 HOXD9P28356 352 aaPredicted RBP22.15■■□□□ 1.14
CCDC9-201ENST00000221922 TRAP1Q12931 704 aaKnown RBP22.15■■□□□ 1.14
CCDC9-201ENST00000221922 PDAP1Q13442 181 aaKnown RBP22.15■■□□□ 1.14
CCDC9-201ENST00000221922 IKBKEQ14164 716 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 FASTKQ14296 549 aaKnown RBP22.15■■□□□ 1.14
CCDC9-201ENST00000221922 IL23RQ5VWK5 629 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 CFAP52Q8N1V2 620 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 PCDH20Q8N6Y1 951 aaKnown RBP22.15■■□□□ 1.14
CCDC9-201ENST00000221922 MYRFLQ96LU7 910 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 ARL5AQ9Y689 179 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 ANKRD36A6QL64 1941 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 GJB5O95377 273 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 SEC24AO95486 1093 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 CCL5P13501 91 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 IMPDH1P20839 514 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 NFKB2Q00653 900 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 GALNT3Q14435 633 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 C6orf52Q5T4I8 152 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 GPR158Q5T848 1215 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 TPGS2Q68CL5 300 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 REP15Q6BDI9 236 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 IL31Q6EBC2 164 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 CNKSR3Q6P9H4 555 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 ZNF461Q8TAF7 563 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 L3HYPDHQ96EM0 354 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 DUS3LQ96G46 650 aaKnown RBP22.15■■□□□ 1.14
CCDC9-201ENST00000221922 PSKH2Q96QS6 385 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 RNF208Q9H0X6 261 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 CATSPERZQ9NTU4 200 aa22.15■■□□□ 1.14
CCDC9-201ENST00000221922 UBA2Q9UBT2 640 aaPredicted RBP22.15■■□□□ 1.14
CCDC9-201ENST00000221922 BPTFQ12830 3046 aa22.14■■□□□ 1.14
CCDC9-201ENST00000221922 VILLO15195 856 aa22.14■■□□□ 1.13
CCDC9-201ENST00000221922 COCHO43405 550 aa22.14■■□□□ 1.13
CCDC9-201ENST00000221922 FAM58BPP0C7Q3 252 aa22.14■■□□□ 1.13
CCDC9-201ENST00000221922 RHDQ02161 417 aa22.14■■□□□ 1.13
CCDC9-201ENST00000221922 GK3PQ14409 553 aa22.14■■□□□ 1.13
CCDC9-201ENST00000221922 SLC5A9Q2M3M2 681 aa22.14■■□□□ 1.13
CCDC9-201ENST00000221922 AGKQ53H12 422 aa22.14■■□□□ 1.13
CCDC9-201ENST00000221922 GALNT4Q8N4A0 578 aa22.14■■□□□ 1.13
CCDC9-201ENST00000221922 OR4L1Q8NH43 312 aa22.14■■□□□ 1.13
CCDC9-201ENST00000221922 ATP6V1E2Q96A05 226 aa22.14■■□□□ 1.13
CCDC9-201ENST00000221922 TRIB3Q96RU7 358 aa22.14■■□□□ 1.13
CCDC9-201ENST00000221922 CINPQ9BW66 212 aaPredicted RBP22.14■■□□□ 1.13
CCDC9-201ENST00000221922 ALG9Q9H6U8 611 aa22.14■■□□□ 1.13
CCDC9-201ENST00000221922 CD300AQ9UGN4 299 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms