RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 LAMP2P13473 410 aa14.84□□□□□ -0.03
UBR5-201ENST00000220959 EIF2S3P41091 472 aaKnown RBP14.84□□□□□ -0.03
UBR5-201ENST00000220959 CEBPGP53567 150 aa14.84□□□□□ -0.03
UBR5-201ENST00000220959 CPTPQ5TA50 214 aa14.84□□□□□ -0.03
UBR5-201ENST00000220959 L2HGDHQ9H9P8 463 aa14.84□□□□□ -0.03
UBR5-201ENST00000220959 HCN3Q9P1Z3 774 aa14.84□□□□□ -0.03
UBR5-201ENST00000220959 CDH7Q9ULB5 785 aa14.84□□□□□ -0.03
UBR5-201ENST00000220959 SAMD4AQ9UPU9 718 aaKnown RBP14.84□□□□□ -0.03
UBR5-201ENST00000220959 CAMSAP1Q5T5Y3 1602 aa14.84□□□□□ -0.03
UBR5-201ENST00000220959 MBD5Q9P267 1494 aa14.84□□□□□ -0.03
UBR5-201ENST00000220959 RPL19P84098 196 aaKnown RBP14.84□□□□□ -0.03
UBR5-201ENST00000220959 PIGZQ86VD9 579 aa14.84□□□□□ -0.03
UBR5-201ENST00000220959 ZNF433Q8N7K0 673 aaPredicted RBP14.84□□□□□ -0.03
UBR5-201ENST00000220959 STOML2Q9UJZ1 356 aa14.84□□□□□ -0.03
UBR5-201ENST00000220959 NOS1APO75052 506 aaPredicted RBP14.84□□□□□ -0.03
UBR5-201ENST00000220959 GOT1P17174 413 aa14.84□□□□□ -0.03
UBR5-201ENST00000220959 ZNF155Q12901 538 aaPredicted RBP14.84□□□□□ -0.03
UBR5-201ENST00000220959 RAPGEFL1Q9UHV5 662 aa14.84□□□□□ -0.03
UBR5-201ENST00000220959 AZIN1O14977 448 aa14.83□□□□□ -0.03
UBR5-201ENST00000220959 SEC23AQ15436 765 aa14.83□□□□□ -0.03
UBR5-201ENST00000220959 EIF1ADQ8N9N8 165 aaKnown RBP14.83□□□□□ -0.03
UBR5-201ENST00000220959 OR2L3Q8NG85 312 aa14.83□□□□□ -0.03
UBR5-201ENST00000220959 PRDM12Q9H4Q4 367 aa14.83□□□□□ -0.03
UBR5-201ENST00000220959 CNOT6Q9ULM6 557 aaKnown RBP14.83□□□□□ -0.03
UBR5-201ENST00000220959 FGF1P05230 155 aa14.83□□□□□ -0.03
UBR5-201ENST00000220959 S100A1P23297 94 aa14.83□□□□□ -0.03
UBR5-201ENST00000220959 ERVK-21P61565 698 aa14.83□□□□□ -0.03
UBR5-201ENST00000220959 IL18Q14116 193 aa14.83□□□□□ -0.03
UBR5-201ENST00000220959 TMEM119Q4V9L6 283 aa14.83□□□□□ -0.03
UBR5-201ENST00000220959 TAPBPLQ9BX59 468 aa14.83□□□□□ -0.03
UBR5-201ENST00000220959 EGFL7Q9UHF1 273 aa14.83□□□□□ -0.03
UBR5-201ENST00000220959 ZNF490Q9ULM2 529 aaPredicted RBP14.83□□□□□ -0.03
UBR5-201ENST00000220959 TBC1D24Q9ULP9 559 aa14.83□□□□□ -0.03
UBR5-201ENST00000220959 GNEQ9Y223 722 aaKnown RBP14.83□□□□□ -0.03
UBR5-201ENST00000220959 POLR3HQ9Y535 204 aaPredicted RBP14.83□□□□□ -0.03
UBR5-201ENST00000220959 ATG13O75143 517 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 CYP4B1P13584 511 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 C2orf80Q0P641 193 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 HES2Q9Y543 173 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 LOC110117498-PIK3R3F6TDL0 507 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 H3BM21 787 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 SHMT1P34896 483 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 ARF3P61204 181 aaPredicted RBP14.83□□□□□ -0.04
UBR5-201ENST00000220959 ARF1P84077 181 aaKnown RBP14.83□□□□□ -0.04
UBR5-201ENST00000220959 MINDY4Q4G0A6 757 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 POLNQ7Z5Q5 900 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 CFAP52Q8N1V2 620 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 PPP1R13LQ8WUF5 828 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 PIK3R3Q92569 461 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 CMPK1P30085 196 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 CTBP1Q13363 440 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 XKR4Q5GH76 650 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 CDKAL1Q5VV42 579 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 GPR107Q5VW38 600 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 SPATA19Q7Z5L4 167 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 MDM4O15151 490 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 HCN1O60741 890 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 CRYBB1P53674 252 aaPredicted RBP14.83□□□□□ -0.04
UBR5-201ENST00000220959 VGLL4Q14135 290 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 ZBTB6Q15916 424 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 FAM153BP0C7A2 387 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 MAMLD1Q13495 774 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 DEFB115Q30KQ5 88 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 FAM153CQ494X1 144 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 SLC30A6Q6NXT4 461 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 FAM35AQ86V20 835 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 OR6K2Q8NGY2 324 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 CKAP2Q8WWK9 683 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 TRIM64A6NGJ6 449 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 CD52P31358 61 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.83□□□□□ -0.04
UBR5-201ENST00000220959 DHRS1Q96LJ7 313 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 CCNB1IP1Q9NPC3 277 aa14.83□□□□□ -0.04
UBR5-201ENST00000220959 SLC22A3O75751 556 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 PPP1R26Q5T8A7 1209 aaPredicted RBP14.82□□□□□ -0.04
UBR5-201ENST00000220959 ALLCQ8N6M5 410 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 COPS7AQ9UBW8 275 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 ITGAVP06756 1048 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 SDHAF4Q5VUM1 108 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 SRFBP1Q8NEF9 429 aaKnown RBP14.82□□□□□ -0.04
UBR5-201ENST00000220959 MYO19Q96H55 970 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 PFDN2Q9UHV9 154 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 RHPN2P1A8MT19 583 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 PPP3R1P63098 170 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 TEAD4Q15561 434 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 HCAR2Q8TDS4 363 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 GPR152Q8TDT2 470 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 ZNF670Q9BS34 389 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 KCTD5Q9NXV2 234 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 TLX3O43711 291 aaPredicted RBP14.82□□□□□ -0.04
UBR5-201ENST00000220959 SPATA31D3P0C874 917 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 PSMD8P48556 350 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 RNF19BQ6ZMZ0 732 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 SPATA31D4Q6ZUB0 917 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 OR14C36Q8NHC7 312 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 GDF3Q9NR23 364 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 C15orf41Q9Y2V0 281 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 TRBV23OR9-2A0A075B6M9 112 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 ATP6AP2A0A1C7CYW4 349 aa14.82□□□□□ -0.04
UBR5-201ENST00000220959 ATP6AP2O75787 350 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms