RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 COQ7Q99807 217 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 ADAM7Q9H2U9 754 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 ARIH1Q9Y4X5 557 aaPredicted RBP9.41□□□□□ -0.9
CCDC113-201ENST00000219299 PCDHA11Q9Y5I1 949 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 BTN3A1O00481 513 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 ALDH1A2O94788 518 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 PSMG1O95456 288 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 MAT2AP31153 395 aaKnown RBP9.4□□□□□ -0.9
CCDC113-201ENST00000219299 SOX6P35712 828 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 SMARCD2Q92925 531 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 TMEM79Q9BSE2 394 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 ZNHIT2Q9UHR6 403 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 TDRKHQ9Y2W6 561 aaKnown RBP9.4□□□□□ -0.9
CCDC113-201ENST00000219299 FAM32AQ9Y421 112 aaKnown RBP9.4□□□□□ -0.9
CCDC113-201ENST00000219299 SESN1Q9Y6P5 492 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 RP1L1Q8IWN7 2480 aaPredicted RBP9.4□□□□□ -0.9
CCDC113-201ENST00000219299 SLC31A1O15431 190 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.4□□□□□ -0.9
CCDC113-201ENST00000219299 TBL3Q12788 808 aaKnown RBP9.4□□□□□ -0.9
CCDC113-201ENST00000219299 CAMK2GQ13555 558 aaPredicted RBP9.4□□□□□ -0.9
CCDC113-201ENST00000219299 PKN3Q6P5Z2 889 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 CCDC80Q76M96 950 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 RRM2BQ7LG56 351 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 MREGQ8N565 214 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 TCP10LQ8TDR4 215 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 MAGED4Q96JG8 741 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 RIC8BQ9NVN3 520 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 SLCO1B7G3V0H7 640 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 FCHO1O14526 889 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 ASNA1O43681 348 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 PRKCGP05129 697 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 HLA-DQB2P05538 268 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 TPSB2P20231 275 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 IL2P60568 153 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 FASTKD3Q14CZ7 662 aaKnown RBP9.4□□□□□ -0.9
CCDC113-201ENST00000219299 TPSAB1Q15661 275 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 ZFP1Q6P2D0 407 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 C16orf46Q6P387 395 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 DRICH1Q6PGQ1 229 aaPredicted RBP9.4□□□□□ -0.9
CCDC113-201ENST00000219299 AFTPHQ6ULP2 937 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 PAQR9Q6ZVX9 377 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 MTSS1LQ765P7 747 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 LDB1Q86U70 411 aaPredicted RBP9.4□□□□□ -0.9
CCDC113-201ENST00000219299 MMAAQ8IVH4 418 aaKnown RBP9.4□□□□□ -0.9
CCDC113-201ENST00000219299 PQLC3Q8N755 202 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 ZNF398Q8TD17 642 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 WFIKKN2Q8TEU8 576 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 ELMO1Q92556 727 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 IGSF8Q969P0 613 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 LRRC4CQ9HCJ2 640 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 NMRK1Q9NWW6 199 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 CLCA2Q9UQC9 943 aa9.4□□□□□ -0.9
CCDC113-201ENST00000219299 TPST1O60507 370 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 TPBGLP0DKB5 382 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 ZNF23P17027 643 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 HTR1BP28222 390 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 SERPINB5P36952 375 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 ITGA9Q13797 1035 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 C9orf50Q5SZB4 431 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 KIAA0319Q5VV43 1072 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 PM20D1Q6GTS8 502 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.4□□□□□ -0.91
CCDC113-201ENST00000219299 SPPL3Q8TCT6 385 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 TMEM237Q96Q45 408 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 ZNF576Q9H609 170 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 LCHNA4D1U4 455 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 CD3EAPO15446 510 aaKnown RBP9.4□□□□□ -0.91
CCDC113-201ENST00000219299 CDK14O94921 469 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 GSNP06396 782 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 CRABP2P29373 138 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 CSTF3Q12996 717 aaKnown RBP9.4□□□□□ -0.91
CCDC113-201ENST00000219299 GSTA3Q16772 222 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 ITPRIPL2Q3MIP1 535 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 ARMCX4Q5H9R4 360 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 RNASEH2BQ5TBB1 312 aaKnown RBP9.4□□□□□ -0.91
CCDC113-201ENST00000219299 ZCCHC7Q8N3Z6 543 aaKnown RBP9.4□□□□□ -0.91
CCDC113-201ENST00000219299 GLIS1Q8NBF1 620 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 MCOLN3Q8TDD5 553 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 AP2M1Q96CW1 435 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 NR1H4Q96RI1 486 aaPredicted RBP9.4□□□□□ -0.91
CCDC113-201ENST00000219299 ACSS3Q9H6R3 686 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 ACTR8Q9H981 624 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 IL1RL2Q9HB29 575 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 SPHK2Q9NRA0 654 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 UBAP1Q9NZ09 502 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 RPL26L1Q9UNX3 145 aaKnown RBP9.4□□□□□ -0.91
CCDC113-201ENST00000219299 MYRFQ9Y2G1 1151 aa9.4□□□□□ -0.91
CCDC113-201ENST00000219299 SNX3O60493 162 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 CXCL10P02778 98 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 ASLP04424 464 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 CCDC166P0CW27 439 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 HOXB8P17481 243 aaPredicted RBP9.39□□□□□ -0.91
CCDC113-201ENST00000219299 C4BPBP20851 252 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 BGNP21810 368 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 MLLT1Q03111 559 aaPredicted RBP9.39□□□□□ -0.91
CCDC113-201ENST00000219299 PLEKHG6Q3KR16 790 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 VITQ6UXI7 678 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 DEFB107AQ8IZN7 70 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 CCDC126Q96EE4 140 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 OXNAD1Q96HP4 312 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms