RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 NSUN5Q96P11 429 aaKnown RBP17.25■□□□□ 0.35
USB1-201ENST00000219281 ABCD2Q9UBJ2 740 aa17.25■□□□□ 0.35
USB1-201ENST00000219281 PADI3Q9ULW8 664 aa17.25■□□□□ 0.35
USB1-201ENST00000219281 DHRS12A0PJE2 317 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 ANGPT2O15123 496 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 CHRM3P20309 590 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 CCND3P30281 292 aaPredicted RBP17.24■□□□□ 0.35
USB1-201ENST00000219281 CD52P31358 61 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 THPOP40225 353 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 ATP6V0D1P61421 351 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 DCTN2Q13561 401 aaKnown RBP17.24■□□□□ 0.35
USB1-201ENST00000219281 OR4D1Q15615 310 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 PFKFB4Q16877 469 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 CCSAPQ6IQ19 270 aaPredicted RBP17.24■□□□□ 0.35
USB1-201ENST00000219281 CD300LGQ6UXG3 332 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 SPATA2LQ8IUW3 424 aaPredicted RBP17.24■□□□□ 0.35
USB1-201ENST00000219281 SLC45A3Q96JT2 553 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 TRIM8Q9BZR9 551 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 SPC25Q9HBM1 224 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 VPS45Q9NRW7 570 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 SMOXQ9NWM0 555 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 CMTM6Q9NX76 183 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 UXTQ9UBK9 157 aaPredicted RBP17.24■□□□□ 0.35
USB1-201ENST00000219281 WASH4PA8MWX3 477 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 DLGAP1O14490 977 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 TNFRSF10BO14763 440 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 AZIN1O14977 448 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 GPR182O15218 404 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 BMP10O95393 424 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 CYP11A1P05108 521 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 SLC2A3P11169 496 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 FDXRP22570 491 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 EMP3P54852 163 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 TIAL1Q01085 375 aaKnown RBP eCLIP17.24■□□□□ 0.35
USB1-201ENST00000219281 INPP5AQ14642 412 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 CAMK1DQ8IU85 385 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 EPHX4Q8IUS5 362 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 ZNF786Q8N393 782 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 PSMG2Q969U7 264 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 TRIM15Q9C019 465 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 SP110Q9HB58 689 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 BTRCQ9Y297 605 aa17.24■□□□□ 0.35
USB1-201ENST00000219281 A0A0J9YVX5 310 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 AQP12BA6NM10 295 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 LDB2O43679 373 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 CNTN5O94779 1100 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 GOT2P00505 430 aaKnown RBP17.23■□□□□ 0.35
USB1-201ENST00000219281 FGF4P08620 206 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 LINC00032P0C843 101 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 IL10P22301 178 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 ETFBP38117 255 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 PRMT9Q6P2P2 845 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 RAB44Q7Z6P3 723 aaPredicted RBP17.23■□□□□ 0.35
USB1-201ENST00000219281 PHYKPLQ8IUZ5 450 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 SCN4BQ8IWT1 228 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 AQP12AQ8IXF9 295 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 UMODL1-AS1Q8N2C9 162 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 MINDY1Q8N5J2 469 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 KLHDC9Q8NEP7 349 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 TRPC4APQ8TEL6 797 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 TUBGCP3Q96CW5 907 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 TUBB1Q9H4B7 451 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 AGPAT4Q9NRZ5 378 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 IRAK4Q9NWZ3 460 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 F8W810 466 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 FXYD1O00168 92 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 GJB3O75712 270 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 SEC24DO94855 1032 aaPredicted RBP17.23■□□□□ 0.35
USB1-201ENST00000219281 OR4Q2P0C623 313 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 HGFP14210 728 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 OXTRP30559 389 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 GALK1P51570 392 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 ADARP55265 1226 aaKnown RBP17.23■□□□□ 0.35
USB1-201ENST00000219281 TSPY1Q01534 308 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 RPS6KA2Q15349 733 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 ALFQ53S48 1182 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 INTS11Q5TA45 600 aaKnown RBP17.23■□□□□ 0.35
USB1-201ENST00000219281 TTC33Q6PID6 262 aaPredicted RBP17.23■□□□□ 0.35
USB1-201ENST00000219281 THEM5Q8N1Q8 247 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 MFSD2AQ8NA29 543 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 SERPINB11Q96P15 392 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 ARL5AQ9Y689 179 aa17.23■□□□□ 0.35
USB1-201ENST00000219281 RNF103-CHMP3A0A140T963 221 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 ZNF623O75123 536 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 GLP2RO95838 553 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 ITGB1P05556 798 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 ATXN1LP0C7T5 689 aaKnown RBP17.22■□□□□ 0.35
USB1-201ENST00000219281 HSD17B1P14061 328 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 SLC6A2P23975 617 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 FASP25445 335 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 PSMA4P25789 261 aaKnown RBP17.22■□□□□ 0.35
USB1-201ENST00000219281 NRG1Q02297 640 aaPredicted RBP17.22■□□□□ 0.35
USB1-201ENST00000219281 SEMA3AQ14563 771 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 MAPRE1Q15691 268 aaKnown RBP17.22■□□□□ 0.35
USB1-201ENST00000219281 SDHAF4Q5VUM1 108 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 KANK2Q63ZY3 851 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 CMTR2Q8IYT2 770 aaKnown RBP17.22■□□□□ 0.35
USB1-201ENST00000219281 PGBD5Q8N414 524 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 PACRGLQ8N7B6 248 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 RSPH1Q8WYR4 309 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms