RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 ELMSAN1Q6PJG2 1045 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 FAM124AQ86V42 546 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 RTL3Q8N8U3 475 aaKnown RBP12.05□□□□□ -0.48
CHPF2-201ENST00000035307 ZNF398Q8TD17 642 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 ACMSDQ8TDX5 336 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 OTULINQ96BN8 352 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 MED8Q96G25 268 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 FUBP3Q96I24 572 aaKnown RBP eCLIP12.05□□□□□ -0.48
CHPF2-201ENST00000035307 ADGRE3Q9BY15 652 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 PCDHAC1Q9H158 963 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 ASB8Q9H765 288 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 TLR9Q9NR96 1032 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.05□□□□□ -0.48
CHPF2-201ENST00000035307 RHBDL2Q9NX52 303 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 SBF1O95248 1867 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 KNTC1P50748 2209 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 CABIN1Q9Y6J0 2220 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 DPPA5A6NC42 116 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 PITPNM1O00562 1244 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 XYLBO75191 536 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 TIPRLO75663 272 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 PCDH8O95206 1070 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 STAU1O95793 577 aaKnown RBP12.05□□□□□ -0.48
CHPF2-201ENST00000035307 IL1BP01584 269 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 ALPIP09923 528 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 STK19P49842 368 aaPredicted RBP12.05□□□□□ -0.48
CHPF2-201ENST00000035307 CCNG1P51959 295 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 PFKPQ01813 784 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 BCL2L1Q07817 233 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 CPSF6Q16630 551 aaKnown RBP eCLIP12.05□□□□□ -0.48
CHPF2-201ENST00000035307 CCDC149Q6ZUS6 474 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 GPSM1Q86YR5 675 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 HHIPL1Q96JK4 782 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 ARL5AQ9Y689 179 aa12.05□□□□□ -0.48
CHPF2-201ENST00000035307 ARID1BQ8NFD5 2236 aaPredicted RBP12.05□□□□□ -0.48
CHPF2-201ENST00000035307 UBXN8O00124 270 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 CD3EAPO15446 510 aaKnown RBP12.04□□□□□ -0.48
CHPF2-201ENST00000035307 KIF1CO43896 1103 aaKnown RBP12.04□□□□□ -0.48
CHPF2-201ENST00000035307 TBC1D4O60343 1298 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 LRATO95237 230 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 ALBP02768 609 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 SOD2P04179 222 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 NTRK1P04629 796 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 EPCAMP16422 314 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 ATP6V1C1P21283 382 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 CST5P28325 142 aaPredicted RBP12.04□□□□□ -0.48
CHPF2-201ENST00000035307 SOAT1P35610 550 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 STARD3Q14849 445 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 TRIP4Q15650 581 aaPredicted RBP12.04□□□□□ -0.48
CHPF2-201ENST00000035307 HECTD2Q5U5R9 776 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 STK32CQ86UX6 486 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 FBXO27Q8NI29 283 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 SMAD5Q99717 465 aaKnown RBP12.04□□□□□ -0.48
CHPF2-201ENST00000035307 CLSTN3Q9BQT9 956 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 TRIM8Q9BZR9 551 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 PPM1HQ9ULR3 514 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 PCDHGB4Q9UN71 923 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 BIRC5O15392 142 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 LZTS3O60299 673 aaPredicted RBP12.04□□□□□ -0.48
CHPF2-201ENST00000035307 SEC22BO75396 215 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 RFPL1O75677 317 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 TCEA3O75764 348 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 CSKP41240 450 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 VIPR2P41587 438 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 SKIV2L2P42285 1042 aaKnown RBP12.04□□□□□ -0.48
CHPF2-201ENST00000035307 ARHGDIAP52565 204 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 MTX3Q5HYI7 312 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 OR9I1Q8NGQ6 314 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 TCEAL4Q96EI5 215 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 FCRL3Q96P31 734 aaPredicted RBP12.04□□□□□ -0.48
CHPF2-201ENST00000035307 CIB1Q99828 191 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 RNF38Q9H0F5 515 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 VPS45Q9NRW7 570 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 ZNF212Q9UDV6 495 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 ARHGAP10A1A4S6 786 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 TRIM43BA6NCK2 446 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 SLCO1B7G3V0H7 640 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 TRIM24O15164 1050 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 TGM5O43548 720 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 TM7SF2O76062 418 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 AHSGP02765 367 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 NEK3P51956 506 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 VPS26BQ4G0F5 336 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 FNDC3BQ53EP0 1204 aaKnown RBP12.04□□□□□ -0.48
CHPF2-201ENST00000035307 BBS7Q8IWZ6 715 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 DSELQ8IZU8 1212 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 TRIM43Q96BQ3 446 aaPredicted RBP12.04□□□□□ -0.48
CHPF2-201ENST00000035307 C7orf26Q96N11 449 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 KCTD14Q9BQ13 255 aaPredicted RBP12.04□□□□□ -0.48
CHPF2-201ENST00000035307 ROGDIQ9GZN7 287 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 WDR6Q9NNW5 1121 aaKnown RBP12.04□□□□□ -0.48
CHPF2-201ENST00000035307 MARCH5Q9NX47 278 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 TRAF6Q9Y4K3 522 aa12.04□□□□□ -0.48
CHPF2-201ENST00000035307 PTGES3LE9PB15 166 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 MTX2O75431 263 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 TSHRP16473 764 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 SLC9A4Q6AI14 798 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 PIWIL4Q7Z3Z4 852 aaKnown RBP12.03□□□□□ -0.48
CHPF2-201ENST00000035307 SLC22A9Q8IVM8 553 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 CATSPER1Q8NEC5 780 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms