RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Gsdmc3Q8CB12 480 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Vmn1r79Q8R285 306 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Slc44a3Q921V7 656 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Itfg1Q99KW9 610 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Q99LU8 229 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Fam83dQ9D7I8 585 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Dpysl5Q9EQF6 564 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Il21rQ9JHX3 529 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 4933424G06RikA0A140LIP3 267 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 EXOC1LB9EK06 172 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Rps6ka3P18654 740 aaKnown RBP15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Snrpd1P62315 119 aaKnown RBP15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Polr2lP62876 67 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Itm2aQ61500 263 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Sgo2Q7TSY8 1164 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Sfr1Q8BP27 319 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Fam20bQ8VCS3 409 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Mrgpra2aA0A0R4J1Z0 331 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Kpna3O35344 521 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 DmpkP54265 631 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Psd2Q6P1I6 770 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Tnpo3Q6P2B1 923 aaKnown RBP15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 RhoqQ8R527 205 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Cmc1Q9CPZ8 106 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Pou5f2Q9DAC9 329 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Sh3glb1Q9JK48 365 aa15.53■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Sppl2cA2A6C4 690 aa15.52■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Lgr4A2ARI4 951 aa15.52■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Coro1aO89053 461 aa15.52■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Ifit3Q64345 403 aa15.52■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Olfr330Q8VGD9 315 aa15.52■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Adgrf4Q9D2L6 698 aa15.52■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Tex28B1AYN9 409 aa15.52■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Zfp105G3X9I0 524 aa15.52■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Dpysl2O08553 572 aaKnown RBP15.52■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 AcadsQ07417 412 aaKnown RBP15.52■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Gadl1Q80WP8 550 aa15.52■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Tfb1mQ8JZM0 345 aaKnown RBP15.52■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Vmn1r206Q8R277 312 aa15.52■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Dlg2Q91XM9 852 aa15.52■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Mrps17Q9CQE3 120 aaKnown RBP15.52■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Gsdmdc1Q9D8T2 487 aa15.52■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Nt5cQ9JM14 200 aa15.52■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Gm5478D3Z6R0 159 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ebf2O08792 575 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 KlO35082 1014 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Azin1O35484 448 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 PenkP22005 268 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Mpp1P70290 466 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 ArvcfP98203 962 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Mtf2Q02395 593 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Lrrc8bQ5DU41 803 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 GnasQ6R0H7 1133 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 PdhxQ8BKZ9 501 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Usp43Q8BUM9 1132 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Hectd2Q8CDU6 774 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Cdc16Q8R349 620 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Slc25a3Q8VEM8 357 aaKnown RBP15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 AcadsbQ9DBL1 432 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Pkd2l1A2A259 760 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Fam151bD3YUE4 279 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 PiggD3Z3Y1 983 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Gm5145F8VQ88 278 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Gm3138K7N754 218 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 NmbrO54799 390 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Gas2P11862 314 aaKnown RBP15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 LdlrP35951 862 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Gli1P47806 1111 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 PamP97467 979 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Serpina3mQ03734 418 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 PstkQ8BP74 359 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Nckap1lQ8K1X4 1134 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 St7Q99M96 577 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Chaf1bQ9D0N7 572 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Tmem80Q9D3H0 123 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Spatc1lQ9D9W0 342 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Kat2aQ9JHD2 830 aa15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 VapbQ9QY76 243 aaKnown RBP15.52■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Pate3B3GLJ3 98 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Scamp3O35609 349 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Cd247P24161 164 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 RgnQ64374 299 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Mrps35Q8BJZ4 320 aaKnown RBP15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Rnf219Q8K2Y0 722 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Tcf7l2Q924A0 459 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Rnf146Q9CZW6 359 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Tmem114Q9D563 222 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ampd2Q9DBT5 798 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Olfr220E9Q050 325 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Kif1cO35071 1100 aaKnown RBP15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Gria1P23818 907 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Q3U4G0 281 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Olfr295Q7TS08 309 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Stard13Q923Q2 1113 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Chmp1b1Q99LU0 199 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Rpl17Q9CPR4 184 aaKnown RBP15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Spata1Q9D5R4 444 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Smarcb1Q9Z0H3 385 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Btbd19S4R1I0 287 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Gm7073E9QAS1 335 aa15.51■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms