RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 5830411N06RikB3F5L4 1112 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Gm7971J3QMM8 481 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Tpst2O88856 376 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 AdslP54822 484 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Sec31bQ3TZ89 1158 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Slc22a23Q3UHH2 689 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Glp2rQ5IXF8 512 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Dyrk2Q5U4C9 599 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Fzd6Q61089 709 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Hmgxb4Q80Y32 594 aaKnown RBP16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Nol6Q8R5K4 1152 aaKnown RBP16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Guca1bQ8VBV8 201 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Dennd2dQ91VV4 469 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Cyp2c50Q91X77 490 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Lrrc18Q9CQ07 262 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Oser1Q9D722 291 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 NbnQ9R207 751 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Plxnb3Q9QY40 1902 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Srp72F8VQC1 671 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 P01668 110 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Prf1P10820 554 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 BdnfP21237 249 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Ppp3cbP48453 525 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Defa8P50706 81 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Uba1Q02053 1058 aaKnown RBP16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Cpne7Q0VE82 557 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Dnajb14Q149L6 379 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 BtrcQ3ULA2 605 aaKnown RBP16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Akr1clQ3UXL1 322 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Mapre1Q61166 268 aaKnown RBP16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Olfr698Q7TRN4 311 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Trim62Q80V85 475 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Pabpc5Q8C7D3 381 aaKnown RBP16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Vmn1r205Q8R276 316 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Wnt9aQ8R5M2 365 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Exd2Q8VEG4 650 aaKnown RBP16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Q922M7 232 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Tpd52l2Q9CYZ2 220 aaKnown RBP16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Bag6Q9Z1R2 1154 aaKnown RBP16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Numa1E9Q7G0 2094 aaKnown RBP16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 1810010D01RikA0A1L1SR87 51 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Gm13212B1ASQ7 799 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Klhl4B1AZR0 717 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Pate1E9Q658 125 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 C6E9Q6D8 931 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Fgf10O35565 209 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Per3O70361 1113 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Hk1P17710 974 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Hspa4lP48722 838 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Actr5Q80US4 605 aaKnown RBP16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Ugt2a1Q80X89 528 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Ccdc32Q8BS39 179 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Mark1Q8VHJ5 795 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Tnip2Q99JG7 430 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Htr3bQ9JHJ5 437 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Atg2aQ6P4T0 1914 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Olfr671A0A1B0GSN5 317 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Gm5483B2RV77 97 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Krt4P07744 525 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Slfn4Q3UV66 602 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Phlda1Q62392 405 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 XpaQ64267 272 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Nlgn2Q69ZK9 836 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Skiv2lQ6NZR5 1244 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Dpy19l3Q71B07 716 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Ofcc1Q8BGX4 166 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Tmem252Q8C353 183 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Creb5Q8K1L0 357 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Zfp65Q91W94 390 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 DhddsQ99KU1 333 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Ddx50Q99MJ9 734 aaKnown RBP16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Lrrc4Q99PH1 652 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Hddc3Q9D114 179 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 MkksQ9JI70 570 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Smpd3Q9JJY3 655 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Rgs1Q9JL25 209 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Nt5cQ9JM14 200 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 AadatQ9WVM8 425 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Zscan5bB2RTN3 468 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Psma3O70435 255 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Rpl36P47964 105 aaKnown RBP16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 PrkacbP68181 351 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Cyp2c66Q5GLZ0 490 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Cldn11Q60771 207 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Caprin1Q60865 707 aaKnown RBP16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 AtminQ6P9S1 818 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Ces2bQ6PDB7 556 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Mib1Q80SY4 1006 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Parp9Q8CAS9 866 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Vmn1r203Q8R273 311 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Txndc9Q9CQ79 226 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Ndufaf7Q9CWG8 436 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Pcm1Q9R0L6 2025 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Cep350E9Q309 3095 aa16.4■□□□□ 0.22
Shh-201ENSMUST00000002708 Btbd35f16A0A087WSN2 498 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Kbtbd6E9PYD7 486 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Kbtbd7G5E8C2 690 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Sgo2bJ3QMK1 1167 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Gm14496K7N5U4 849 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Psmd7P26516 321 aa16.39■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms