RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 ZC3HC1Q86WB0 502 aaKnown RBP8.86□□□□□ -0.99
PHGDH-219ENST00000641513 C12orf40Q86WS4 652 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 CNTN4Q8IWV2 1026 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 KIAA1958Q8N8K9 716 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 ENDOVQ8N8Q3 282 aaKnown RBP8.86□□□□□ -0.99
PHGDH-219ENST00000641513 C2CD4AQ8NCU7 369 aaPredicted RBP8.86□□□□□ -0.99
PHGDH-219ENST00000641513 MDGA1Q8NFP4 955 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 OR4L1Q8NH43 312 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 GRIN3AQ8TCU5 1115 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 ISL2Q96A47 359 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 E2F7Q96AV8 911 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 ISG20Q96AZ6 181 aaKnown RBP8.86□□□□□ -0.99
PHGDH-219ENST00000641513 SKA1Q96BD8 255 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 CEP44Q9C0F1 390 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 MFSD1Q9H3U5 465 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 CAB39LQ9H9S4 337 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 SLCO1B3Q9NPD5 702 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 CATSPERZQ9NTU4 200 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 NLE1Q9NVX2 485 aaPredicted RBP8.86□□□□□ -0.99
PHGDH-219ENST00000641513 POLR3BQ9NW08 1133 aaPredicted RBP8.86□□□□□ -0.99
PHGDH-219ENST00000641513 OBP2AQ9NY56 170 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 DEC1Q9P2X7 70 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 ZFP69BQ9UJL9 534 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 TLK1Q9UKI8 766 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 PLLPQ9Y342 182 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 PKP3Q9Y446 797 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 TRANK1O15050 2925 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 A0A096LPK6 155 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 A0A0U1RQS6 177 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 C1orf232A0A0U1RR37 186 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 CXorf51AA0A1B0GTR3 108 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 TTC34A8MYJ7 566 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 CCDC22O60826 627 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 SOCS5O75159 536 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 SIN3BO75182 1162 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 TBX10O75333 385 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 ZNF821O75541 412 aaPredicted RBP8.85□□□□□ -0.99
PHGDH-219ENST00000641513 HAUS5O94927 633 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 ALDOAP04075 364 aaKnown RBP8.85□□□□□ -0.99
PHGDH-219ENST00000641513 ASLP04424 464 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 UGT2B4P06133 528 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 SRPRAP08240 638 aaKnown RBP8.85□□□□□ -0.99
PHGDH-219ENST00000641513 KRT16P08779 473 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 DLDP09622 509 aaKnown RBP8.85□□□□□ -0.99
PHGDH-219ENST00000641513 CISD3P0C7P0 127 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 FCARP24071 287 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 GDI1P31150 447 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 HADHAP40939 763 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 ZNF140P52738 457 aaPredicted RBP8.85□□□□□ -0.99
PHGDH-219ENST00000641513 RPL26P61254 145 aaKnown RBP8.85□□□□□ -0.99
PHGDH-219ENST00000641513 SEMG2Q02383 582 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 DLX2Q07687 328 aaPredicted RBP8.85□□□□□ -0.99
PHGDH-219ENST00000641513 SF3A3Q12874 501 aaKnown RBP eCLIP8.85□□□□□ -0.991e-9■■■■□ 22.2
PHGDH-219ENST00000641513 RUNX3Q13761 415 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 PDE1CQ14123 709 aaPredicted RBP8.85□□□□□ -0.99
PHGDH-219ENST00000641513 CTC1Q2NKJ3 1217 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 ZRANB3Q5FWF4 1079 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 PPM1JQ5JR12 505 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 N4BP2L1Q5TBK1 243 aaPredicted RBP8.85□□□□□ -0.99
PHGDH-219ENST00000641513 TMEM215Q68D42 235 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 C16orf46Q6P387 395 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 CNSTQ6PJW8 725 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 AFTPHQ6ULP2 937 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 GDPD4Q6W3E5 623 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 DPY19L3Q6ZPD9 716 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 KIAA0408Q6ZU52 694 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 LYSMD3Q7Z3D4 306 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 KIAA0907Q7Z7F0 614 aaPredicted RBP8.85□□□□□ -0.99
PHGDH-219ENST00000641513 LCA5Q86VQ0 697 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 MFSD6LQ8IWD5 586 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 LMNTD2Q8IXW0 634 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 ZNF366Q8N895 744 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 CHST14Q8NCH0 376 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 ARMC2Q8NEN0 867 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 PIH1D2Q8WWB5 315 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 SPOCK2Q92563 424 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 SLC7A6OSQ96CW6 309 aaPredicted RBP8.85□□□□□ -0.99
PHGDH-219ENST00000641513 CDKN2AIPNLQ96HQ2 116 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 SCYL1Q96KG9 808 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 TUBGCP5Q96RT8 1024 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 NDNQ99608 321 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 GPR22Q99680 433 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 PLA2G2FQ9BZM2 168 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 SUV39H2Q9H5I1 410 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 TRPV4Q9HBA0 871 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 CD248Q9HCU0 757 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 BATF3Q9NR55 127 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 LMCD1Q9NZU5 365 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 CLEC1BQ9P126 229 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 MARCH4Q9P2E8 410 aaPredicted RBP8.85□□□□□ -0.99
PHGDH-219ENST00000641513 DCDC2Q9UHG0 476 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 BAIAP2L1Q9UHR4 511 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 FKBPLQ9UIM3 349 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 RIMKLBQ9ULI2 386 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 PLA2G4CQ9UP65 541 aa8.85□□□□□ -0.99
PHGDH-219ENST00000641513 MUC22E2RYF6 1773 aaPredicted RBP8.85□□□□□ -0.99
PHGDH-219ENST00000641513 A0A0J9YYE9 177 aa8.84□□□□□ -0.99
PHGDH-219ENST00000641513 UBA6A0AVT1 1052 aaPredicted RBP8.84□□□□□ -0.99
PHGDH-219ENST00000641513 PFDN6O15212 129 aa8.84□□□□□ -0.99
PHGDH-219ENST00000641513 PHGDHO43175 533 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms