RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 ZSWIM9Q86XI8 627 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.95□□□□□ -0.34
PHGDH-218ENST00000641491 OR4K2Q8NGD2 314 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 GDAP1Q8TB36 358 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 CALML6Q8TD86 181 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 PEX13Q92968 403 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 EBNA1BP2Q99848 306 aaKnown RBP12.95□□□□□ -0.34
PHGDH-218ENST00000641491 SPATA16Q9BXB7 569 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 GPR174Q9BXC1 333 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 PARD6BQ9BYG5 372 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 BPIFA1Q9NP55 256 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 DLGAP2Q9P1A6 1054 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 SERGEFQ9UGK8 458 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 RAB23Q9ULC3 237 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 SOX13Q9UN79 622 aa12.95□□□□□ -0.34
PHGDH-218ENST00000641491 EP300Q09472 2414 aaPredicted RBP12.94□□□□□ -0.34
PHGDH-218ENST00000641491 GLYATL1P3A0A0U1RQE8 302 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 FAM237BA0A1B0GVD1 139 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 GOLGA8CPA6NN73 597 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 F8W8V4 182 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 USP1O94782 785 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 GSTA2P09210 222 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 PMLP29590 882 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 MAT2AP31153 395 aaKnown RBP12.94□□□□□ -0.34
PHGDH-218ENST00000641491 HOXA6P31267 233 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 HMGCLP35914 325 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 MAGEA4P43358 317 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 VSNL1P62760 191 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 FASTKD1Q53R41 847 aaKnown RBP12.94□□□□□ -0.34
PHGDH-218ENST00000641491 ZRANB3Q5FWF4 1079 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 WDR45BQ5MNZ6 344 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 TSTD2Q5T7W7 516 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 KIAA0895LQ68EN5 471 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 RAET1GQ6H3X3 334 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 DENND5AQ6IQ26 1287 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 TSSK4Q6SA08 328 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 ZDHHC24Q6UX98 284 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 SDCCAG8Q86SQ7 713 aaPredicted RBP12.94□□□□□ -0.34
PHGDH-218ENST00000641491 TSPAN33Q86UF1 283 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 RAVER1Q8IY67 606 aaKnown RBP12.94□□□□□ -0.34
PHGDH-218ENST00000641491 GSPT2Q8IYD1 628 aaKnown RBP12.94□□□□□ -0.34
PHGDH-218ENST00000641491 NRSN1Q8IZ57 195 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 RGL4Q8IZJ4 473 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 UBLCP1Q8WVY7 318 aaPredicted RBP12.94□□□□□ -0.34
PHGDH-218ENST00000641491 RLN3Q8WXF3 142 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 SKA1Q96BD8 255 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 AP2M1Q96CW1 435 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 CCDC77Q9BR77 488 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 FAM167BQ9BTA0 163 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 ZSCAN5AQ9BUG6 496 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 PCED1AQ9H1Q7 454 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 EPC1Q9H2F5 836 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 FAM83DQ9H4H8 585 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 C20orf96Q9NUD7 363 aaPredicted RBP12.94□□□□□ -0.34
PHGDH-218ENST00000641491 CRLS1Q9UJA2 301 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 SPO11Q9Y5K1 396 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 IKBKGQ9Y6K9 419 aa12.94□□□□□ -0.34
PHGDH-218ENST00000641491 TPRP12270 2363 aaKnown RBP12.94□□□□□ -0.34
PHGDH-218ENST00000641491 UQCRHLA0A096LP55 91 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 IGHV1OR15-9A0A0B4J2B8 117 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 IGLON5A6NGN9 336 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 K7ESF4 209 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 FPGTO14772 594 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 AREL1O15033 823 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 BUD23O43709 281 aaKnown RBP12.93□□□□□ -0.34
PHGDH-218ENST00000641491 RHOBTB1O94844 696 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 IGLV3-19P01714 112 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 PCCBP05166 539 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 UQCRHP07919 91 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 RALBP11234 206 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 ACSL1P33121 698 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 CNR2P34972 360 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 ETV3P41162 512 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 GPR1P46091 355 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 STC1P52823 247 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 PMS2P54278 862 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 LRRC14Q15048 493 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 BRD3Q15059 726 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 ANGPT1Q15389 498 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 TRADDQ15628 312 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 LONRF1Q17RB8 773 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 ZNF528Q3MIS6 628 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 PDPK2PQ6A1A2 396 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 MRNIPQ6NTE8 343 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 FAM151BQ6UXP7 276 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 LIPIQ6XZB0 460 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 CCNI2Q6ZMN8 369 aaPredicted RBP12.93□□□□□ -0.34
PHGDH-218ENST00000641491 ZNF534Q76KX8 674 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 TRMT10CQ7L0Y3 403 aaKnown RBP12.93□□□□□ -0.34
PHGDH-218ENST00000641491 TAS2R42Q7RTR8 314 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 TRIM69Q86WT6 500 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 GSDMBQ8TAX9 411 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 ULK4Q96C45 1275 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 DNAJC1Q96KC8 554 aaKnown RBP12.93□□□□□ -0.34
PHGDH-218ENST00000641491 NSMCE3Q96MG7 304 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 PLEKHG4BQ96PX9 1271 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 RUFY1Q96T51 708 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 KIFC1Q9BW19 673 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 SLC17A9Q9BYT1 436 aa12.93□□□□□ -0.34
PHGDH-218ENST00000641491 ZCCHC2Q9C0B9 1178 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms