RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 ILF3Q12906 894 aaKnown RBP eCLIP16.69■□□□□ 0.26
PHGDH-213ENST00000641272 MMRN1Q13201 1228 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 KRT81Q14533 505 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 C16orf72Q14CZ0 275 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 CAVIN1Q6NZI2 390 aaKnown RBP16.69■□□□□ 0.26
PHGDH-213ENST00000641272 OGFOD3Q6PK18 319 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 Q6ZVL8 140 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 ZFAND4Q86XD8 727 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 CPNE8Q86YQ8 564 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 SLITRK4Q8IW52 837 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 BBS5Q8N3I7 341 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 RCBTB1Q8NDN9 531 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 BPIFA3Q9BQP9 254 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 NUDT22Q9BRQ3 303 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 FRMD8Q9BZ67 464 aaPredicted RBP16.69■□□□□ 0.26
PHGDH-213ENST00000641272 THAP2Q9H0W7 228 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 MRPL47Q9HD33 250 aaKnown RBP16.69■□□□□ 0.26
PHGDH-213ENST00000641272 TAAR2Q9P1P5 351 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 ANAPC7Q9UJX3 599 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 PLEKHM1Q9Y4G2 1056 aa16.69■□□□□ 0.26
PHGDH-213ENST00000641272 ZFC3H1O60293 1989 aaKnown RBP16.69■□□□□ 0.26
PHGDH-213ENST00000641272 RHPN2P1A8MT19 583 aa16.68■□□□□ 0.26
PHGDH-213ENST00000641272 SMTNL1A8MU46 457 aa16.68■□□□□ 0.26
PHGDH-213ENST00000641272 TMX2-CTNND1H3BSU7 103 aa16.68■□□□□ 0.26
PHGDH-213ENST00000641272 EFSO43281 561 aa16.68■□□□□ 0.26
PHGDH-213ENST00000641272 PGLSO95336 258 aa16.68■□□□□ 0.26
PHGDH-213ENST00000641272 HOXC4P09017 264 aaPredicted RBP16.68■□□□□ 0.26
PHGDH-213ENST00000641272 CD48P09326 243 aa16.68■□□□□ 0.26
PHGDH-213ENST00000641272 LIPCP11150 499 aa16.68■□□□□ 0.26
PHGDH-213ENST00000641272 CYP2A6P11509 494 aaPredicted RBP16.68■□□□□ 0.26
PHGDH-213ENST00000641272 ALDH4A1P30038 563 aa16.68■□□□□ 0.26
PHGDH-213ENST00000641272 HSPA9P38646 679 aaKnown RBP16.68■□□□□ 0.26
PHGDH-213ENST00000641272 SLC25A11Q02978 314 aaKnown RBP16.68■□□□□ 0.26
PHGDH-213ENST00000641272 ZFP36L1Q07352 338 aaKnown RBP16.68■□□□□ 0.26
PHGDH-213ENST00000641272 TSR1Q2NL82 804 aaKnown RBP16.68■□□□□ 0.26
PHGDH-213ENST00000641272 ARMC12Q5T9G4 340 aa16.68■□□□□ 0.26
PHGDH-213ENST00000641272 USP45Q70EL2 814 aa16.68■□□□□ 0.26
PHGDH-213ENST00000641272 MARK2Q7KZI7 788 aaKnown RBP16.68■□□□□ 0.26
PHGDH-213ENST00000641272 GPBAR1Q8TDU6 330 aa16.68■□□□□ 0.26
PHGDH-213ENST00000641272 NSMCE1Q8WV22 266 aa16.68■□□□□ 0.26
PHGDH-213ENST00000641272 JPH3Q8WXH2 748 aaPredicted RBP16.68■□□□□ 0.26
PHGDH-213ENST00000641272 USP7Q93009 1102 aa16.68■□□□□ 0.26
PHGDH-213ENST00000641272 WBP1Q96G27 269 aa16.68■□□□□ 0.26
PHGDH-213ENST00000641272 TEX101Q9BY14 249 aa16.68■□□□□ 0.26
PHGDH-213ENST00000641272 GSDMCQ9BYG8 508 aa16.68■□□□□ 0.26
PHGDH-213ENST00000641272 ZMYND15Q9H091 742 aa16.68■□□□□ 0.26
PHGDH-213ENST00000641272 ISCUQ9H1K1 167 aa16.68■□□□□ 0.26
PHGDH-213ENST00000641272 TTLL3Q9Y4R7 772 aa16.68■□□□□ 0.26
PHGDH-213ENST00000641272 ST14Q9Y5Y6 855 aa16.68■□□□□ 0.26
PHGDH-213ENST00000641272 SDK2Q58EX2 2172 aa16.67■□□□□ 0.26
PHGDH-213ENST00000641272 C9orf172C9J069 976 aa16.67■□□□□ 0.26
PHGDH-213ENST00000641272 J3QKU1 62 aa16.67■□□□□ 0.26
PHGDH-213ENST00000641272 PDE2AO00408 941 aaPredicted RBP16.67■□□□□ 0.26
PHGDH-213ENST00000641272 NUDT21O43809 227 aaKnown RBP16.67■□□□□ 0.26
PHGDH-213ENST00000641272 ECEL1O95672 775 aa16.67■□□□□ 0.26
PHGDH-213ENST00000641272 SOD1P00441 154 aa16.67■□□□□ 0.26
PHGDH-213ENST00000641272 SERPINC1P01008 464 aa16.67■□□□□ 0.26
PHGDH-213ENST00000641272 PDHA1P08559 390 aa16.67■□□□□ 0.26
PHGDH-213ENST00000641272 SERPINB6P35237 376 aa16.67■□□□□ 0.26
PHGDH-213ENST00000641272 ZNF165P49910 485 aa16.67■□□□□ 0.26
PHGDH-213ENST00000641272 CDH6P55285 790 aa16.67■□□□□ 0.26
PHGDH-213ENST00000641272 ITKQ08881 620 aa16.67■□□□□ 0.26
PHGDH-213ENST00000641272 BIRC2Q13490 618 aa16.67■□□□□ 0.26
PHGDH-213ENST00000641272 MARC1Q5VT66 337 aa16.67■□□□□ 0.26
PHGDH-213ENST00000641272 LRRC66Q68CR7 880 aa16.67■□□□□ 0.26
PHGDH-213ENST00000641272 USP53Q70EK8 1073 aa16.67■□□□□ 0.26
PHGDH-213ENST00000641272 LRRN4Q8WUT4 740 aa16.67■□□□□ 0.26
PHGDH-213ENST00000641272 PMEPA1Q969W9 287 aa16.67■□□□□ 0.26
PHGDH-213ENST00000641272 CMKLR1Q99788 373 aa16.67■□□□□ 0.26
PHGDH-213ENST00000641272 NUP85Q9BW27 656 aa16.67■□□□□ 0.26
PHGDH-213ENST00000641272 PHTF1Q9UMS5 762 aa16.67■□□□□ 0.26
PHGDH-213ENST00000641272 B4GAT1O43505 415 aa16.66■□□□□ 0.26
PHGDH-213ENST00000641272 FGF1P05230 155 aa16.66■□□□□ 0.26
PHGDH-213ENST00000641272 CCL4P13236 92 aa16.66■□□□□ 0.26
PHGDH-213ENST00000641272 PNLIPP16233 465 aa16.66■□□□□ 0.26
PHGDH-213ENST00000641272 ACTR1BP42025 376 aa16.66■□□□□ 0.26
PHGDH-213ENST00000641272 GPR1P46091 355 aa16.66■□□□□ 0.26
PHGDH-213ENST00000641272 ACTR1AP61163 376 aa16.66■□□□□ 0.26
PHGDH-213ENST00000641272 B4GALNT1Q00973 533 aa16.66■□□□□ 0.26
PHGDH-213ENST00000641272 CTBSQ01459 385 aa16.66■□□□□ 0.26
PHGDH-213ENST00000641272 DSC2Q02487 901 aa16.66■□□□□ 0.26
PHGDH-213ENST00000641272 HGSNATQ68CP4 663 aa16.66■□□□□ 0.26
PHGDH-213ENST00000641272 ZNF761Q86XN6 746 aaPredicted RBP16.66■□□□□ 0.26
PHGDH-213ENST00000641272 TEKT4Q8WW24 435 aa16.66■□□□□ 0.26
PHGDH-213ENST00000641272 SPOCK2Q92563 424 aa16.66■□□□□ 0.26
PHGDH-213ENST00000641272 EXTL1Q92935 676 aa16.66■□□□□ 0.26
PHGDH-213ENST00000641272 SCAMP4Q969E2 229 aa16.66■□□□□ 0.26
PHGDH-213ENST00000641272 MED8Q96G25 268 aa16.66■□□□□ 0.26
PHGDH-213ENST00000641272 CCDC74BQ96LY2 380 aa16.66■□□□□ 0.26
PHGDH-213ENST00000641272 OR2M4Q96R27 311 aa16.66■□□□□ 0.26
PHGDH-213ENST00000641272 MCCC1Q96RQ3 725 aaPredicted RBP16.66■□□□□ 0.26
PHGDH-213ENST00000641272 SEMA3CQ99985 751 aa16.66■□□□□ 0.26
PHGDH-213ENST00000641272 TMEM98Q9Y2Y6 226 aa16.66■□□□□ 0.26
PHGDH-213ENST00000641272 TENM4Q6N022 2769 aa16.66■□□□□ 0.26
PHGDH-213ENST00000641272 A0A1W2PQ67 120 aa16.65■□□□□ 0.26
PHGDH-213ENST00000641272 INPP4BO15327 924 aa16.65■□□□□ 0.26
PHGDH-213ENST00000641272 NVLO15381 856 aaKnown RBP16.65■□□□□ 0.26
PHGDH-213ENST00000641272 SLC28A2O43868 658 aa16.65■□□□□ 0.26
PHGDH-213ENST00000641272 CPNE6O95741 557 aa16.65■□□□□ 0.26
PHGDH-213ENST00000641272 WT1P19544 449 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms