RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 LRRC74BQ6ZQY2 392 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 TRIM67Q6ZTA4 783 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 MYLK4Q86YV6 388 aaPredicted RBP15.11■□□□□ 0.01
TRIM3-215ENST00000639856 PNPLA1Q8N8W4 532 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 KDM1BQ8NB78 822 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 HJURPQ8NCD3 748 aaPredicted RBP15.11■□□□□ 0.01
TRIM3-215ENST00000639856 TMA16Q96EY4 203 aaKnown RBP15.11■□□□□ 0.01
TRIM3-215ENST00000639856 PPP1R36Q96LQ0 422 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 LBHD1Q9BQE6 289 aaPredicted RBP15.11■□□□□ 0.01
TRIM3-215ENST00000639856 MGME1Q9BQP7 344 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 CINPQ9BW66 212 aaPredicted RBP15.11■□□□□ 0.01
TRIM3-215ENST00000639856 OSBPL1AQ9BXW6 950 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.11■□□□□ 0.01
TRIM3-215ENST00000639856 MARCH4Q9P2E8 410 aaPredicted RBP15.11■□□□□ 0.01
TRIM3-215ENST00000639856 ARHGAP26Q9UNA1 814 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 CCL26Q9Y258 94 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 KCTD3Q9Y597 815 aa15.11■□□□□ 0.01
TRIM3-215ENST00000639856 HELZP42694 1942 aaKnown RBP15.11■□□□□ 0.01
TRIM3-215ENST00000639856 NOTCH4Q99466 2003 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 TRAV19A0A0A6YYK7 116 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 OR51F1A6NGY5 319 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 CCNT2O60583 730 aaKnown RBP15.1■□□□□ 0.01
TRIM3-215ENST00000639856 SERPINF2P08697 491 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 RBP1P09455 135 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 EPCAMP16422 314 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 ITGAXP20702 1163 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 CDC25CP30307 473 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 BTKQ06187 659 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 NSUN2Q08J23 767 aaKnown RBP eCLIP15.1■□□□□ 0.01
TRIM3-215ENST00000639856 GALNT3Q14435 633 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 PGM2L1Q6PCE3 622 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 LDB1Q86U70 411 aaPredicted RBP15.1■□□□□ 0.01
TRIM3-215ENST00000639856 BBS5Q8N3I7 341 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 BRSK1Q8TDC3 778 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 BLOC1S5Q8TDH9 187 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 NRG4Q8WWG1 115 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 TBATAQ96M53 351 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 LENG8Q96PV6 779 aaPredicted RBP15.1■□□□□ 0.01
TRIM3-215ENST00000639856 RTKNQ9BST9 563 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 CCDC28BQ9BUN5 200 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 PLK2Q9NYY3 685 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 SEPT3Q9UH03 358 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 CDYLQ9Y232 598 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 ANKRD36A6QL64 1941 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 MYOFQ9NZM1 2061 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 NEMP2A6NFY4 417 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 NVLO15381 856 aaKnown RBP15.1■□□□□ 0.01
TRIM3-215ENST00000639856 LUC7L3O95232 432 aaKnown RBP15.1■□□□□ 0.01
TRIM3-215ENST00000639856 WISP3O95389 354 aaPredicted RBP15.1■□□□□ 0.01
TRIM3-215ENST00000639856 CD160O95971 181 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 ATP6V1C1P21283 382 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 ADSLP30566 484 aaPredicted RBP15.1■□□□□ 0.01
TRIM3-215ENST00000639856 SLC26A3P40879 764 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 CLNS1AP54105 237 aaKnown RBP15.1■□□□□ 0.01
TRIM3-215ENST00000639856 ILF2Q12905 390 aaKnown RBP15.1■□□□□ 0.01
TRIM3-215ENST00000639856 CUL3Q13618 768 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 ACAP2Q15057 778 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 CYTH1Q15438 398 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 C9orf50Q5SZB4 431 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 FAM217AQ8IXS0 508 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 SHKBP1Q8TBC3 707 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 ANKRD49Q8WVL7 239 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 DNAJC9Q8WXX5 260 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 GCNAQ96QF7 691 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 PSKH2Q96QS6 385 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 NMRK1Q9NWW6 199 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 CLEC4EQ9ULY5 219 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 SH3BP1Q9Y3L3 701 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 ARL5AQ9Y689 179 aa15.1■□□□□ 0.01
TRIM3-215ENST00000639856 PRRC2BQ5JSZ5 2229 aaKnown RBP15.09■□□□□ 0.01
TRIM3-215ENST00000639856 A8MT66 165 aa15.09■□□□□ 0.01
TRIM3-215ENST00000639856 LEFTY2O00292 366 aa15.09■□□□□ 0.01
TRIM3-215ENST00000639856 SLC22A2O15244 555 aa15.09■□□□□ 0.01
TRIM3-215ENST00000639856 IPO13O94829 963 aaKnown RBP15.09■□□□□ 0.01
TRIM3-215ENST00000639856 JUNP05412 331 aaKnown RBP15.09■□□□□ 0.01
TRIM3-215ENST00000639856 THRAP10827 490 aa15.09■□□□□ 0.01
TRIM3-215ENST00000639856 CSKP41240 450 aa15.09■□□□□ 0.01
TRIM3-215ENST00000639856 SCNN1BP51168 640 aa15.09■□□□□ 0.01
TRIM3-215ENST00000639856 CDKN2DP55273 166 aa15.09■□□□□ 0.01
TRIM3-215ENST00000639856 CDH18Q13634 790 aa15.09■□□□□ 0.01
TRIM3-215ENST00000639856 MUM1Q2TAK8 710 aa15.09■□□□□ 0.01
TRIM3-215ENST00000639856 FAM45BPQ6NSW5 357 aa15.09■□□□□ 0.01
TRIM3-215ENST00000639856 TPGS1Q6ZTW0 290 aa15.09■□□□□ 0.01
TRIM3-215ENST00000639856 DEFB107AQ8IZN7 70 aa15.09■□□□□ 0.01
TRIM3-215ENST00000639856 CPSF7Q8N684 471 aaKnown RBP15.09■□□□□ 0.01
TRIM3-215ENST00000639856 RIN3Q8TB24 985 aa15.09■□□□□ 0.01
TRIM3-215ENST00000639856 FAM45AQ8TCE6 357 aa15.09■□□□□ 0.01
TRIM3-215ENST00000639856 DNAJC1Q96KC8 554 aaKnown RBP15.09■□□□□ 0.01
TRIM3-215ENST00000639856 ZNF385DQ9H6B1 395 aa15.09■□□□□ 0.01
TRIM3-215ENST00000639856 SUDS3Q9H7L9 328 aaPredicted RBP15.09■□□□□ 0.01
TRIM3-215ENST00000639856 CDH22Q9UJ99 828 aa15.09■□□□□ 0.01
TRIM3-215ENST00000639856 VPS28Q9UK41 221 aa15.09■□□□□ 0.01
TRIM3-215ENST00000639856 LSM7Q9UK45 103 aaKnown RBP15.09■□□□□ 0.01
TRIM3-215ENST00000639856 ANGPTL2Q9UKU9 493 aa15.09■□□□□ 0.01
TRIM3-215ENST00000639856 RIMKLBQ9ULI2 386 aa15.09■□□□□ 0.01
TRIM3-215ENST00000639856 WASF2Q9Y6W5 498 aa15.09■□□□□ 0.01
TRIM3-215ENST00000639856 RGSL1A5PLK6 1076 aa15.08■□□□□ 0.01
TRIM3-215ENST00000639856 PER2O15055 1255 aa15.08■□□□□ 0.01
TRIM3-215ENST00000639856 ZMPSTE24O75844 475 aa15.08■□□□□ 0.01
TRIM3-215ENST00000639856 NDST3O95803 873 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms