RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 FAM196BA6NMK8 535 aa19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 FESP07332 822 aa19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 PPM1AP35813 382 aa19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 SLC9B1Q4ZJI4 515 aa19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 ZNF484Q5JVG2 852 aa19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 CHSY3Q70JA7 882 aa19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 POU5F2Q8N7G0 328 aa19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 SEMA4DQ92854 862 aa19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 NUDT15Q9NV35 164 aa19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 SLC6A4P31645 630 aa19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 RAB27AP51159 221 aa19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 BARX2Q9UMQ3 279 aaPredicted RBP19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 ITGA10O75578 1167 aa19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 ACSL1P33121 698 aa19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 MTX3Q5HYI7 312 aa19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 HAGHLQ6PII5 290 aaPredicted RBP19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 ACTL9Q8TC94 416 aa19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 NXF3Q9H4D5 531 aaKnown RBP19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 TBX4P57082 545 aa19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 FAM153CQ494X1 144 aa19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 CXorf57Q6NSI4 855 aaKnown RBP19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 GHDCQ8N2G8 530 aa19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 ZKSCAN4Q969J2 545 aaPredicted RBP19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 NSMCE3Q96MG7 304 aa19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 KLQ9UEF7 1012 aa19.34■□□□□ 0.69
CACNA1A-257ENST00000638009 GRIN2DO15399 1336 aa19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 PDYNP01213 254 aa19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 PLEKP08567 350 aaPredicted RBP19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 ZIK1Q3SY52 487 aaPredicted RBP19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 WDR49Q8IV35 697 aa19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 MPP5Q8N3R9 675 aa19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 TRPM4Q8TD43 1214 aa19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 SMG7Q92540 1137 aaKnown RBP19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 MARK4Q96L34 752 aa19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 OMDQ99983 421 aa19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 SMURF1Q9HCE7 757 aa19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 FANCFQ9NPI8 374 aa19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 WASHC1A8K0Z3 465 aa19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 WASH3PC4AMC7 463 aa19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 TULP3O75386 442 aa19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 MKRN4PQ13434 485 aaPredicted RBP19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 PLEKHN1Q494U1 663 aaPredicted RBP19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 HSD17B12Q53GQ0 312 aa19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 WASH2PQ6VEQ5 465 aa19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 NYAP1Q6ZVC0 841 aa19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 UFD1Q92890 307 aa19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 ZSWIM3Q96MP5 696 aa19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 BAZ2AQ9UIF9 1905 aaKnown RBP19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 TRPM1Q7Z4N2 1603 aa19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 PTPN9P43378 593 aa19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 MAPK10P53779 464 aa19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 ATP13A3Q9H7F0 1226 aa19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 ZNF451Q9Y4E5 1061 aa19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 TCOF1Q13428 1488 aaKnown RBP19.33■□□□□ 0.69
CACNA1A-257ENST00000638009 IFNA10P01566 189 aa19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 MTHFRP42898 656 aa19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 AIMP2Q13155 320 aaKnown RBP19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 SYCE2Q6PIF2 218 aa19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 C11orf65Q8NCR3 313 aa19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 NXNL1Q96CM4 212 aa19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 PCDHA11Q9Y5I1 949 aa19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 CLCN5P51795 746 aa19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 SNAPC1Q16533 368 aa19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 PLEKHG6Q3KR16 790 aa19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 CRY2Q49AN0 593 aa19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 SPERTQ8NA61 448 aa19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 GALNT6Q8NCL4 622 aa19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 ZNF180Q9UJW8 692 aa19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 MYBP10242 640 aa19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 MAPK3P27361 379 aaPredicted RBP19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 HSD17B2P37059 387 aa19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 CREMQ03060 361 aa19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 ZSCAN5CA6NGD5 496 aaPredicted RBP19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 AMD1P17707 334 aa19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 OR4A15Q8NGL6 344 aa19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 CSGALNACT1Q8TDX6 532 aa19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 PGM2Q96G03 612 aa19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 CHD5Q8TDI0 1954 aa19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 WDR62O43379 1518 aa19.33■□□□□ 0.68
CACNA1A-257ENST00000638009 TXNL4AP83876 142 aaKnown RBP19.32■□□□□ 0.68
CACNA1A-257ENST00000638009 SPATA22Q8NHS9 363 aa19.32■□□□□ 0.68
CACNA1A-257ENST00000638009 KCTD4Q8WVF5 259 aa19.32■□□□□ 0.68
CACNA1A-257ENST00000638009 PUS3Q9BZE2 481 aaKnown RBP19.32■□□□□ 0.68
CACNA1A-257ENST00000638009 ELOVL4Q9GZR5 314 aa19.32■□□□□ 0.68
CACNA1A-257ENST00000638009 ABI3Q9P2A4 366 aa19.32■□□□□ 0.68
CACNA1A-257ENST00000638009 ATRXP46100 2492 aa19.32■□□□□ 0.68
CACNA1A-257ENST00000638009 AKT2P31751 481 aa19.32■□□□□ 0.68
CACNA1A-257ENST00000638009 IRF8Q02556 426 aa19.32■□□□□ 0.68
CACNA1A-257ENST00000638009 MTMR2Q13614 643 aa19.32■□□□□ 0.68
CACNA1A-257ENST00000638009 RNASEH2BQ5TBB1 312 aaKnown RBP19.32■□□□□ 0.68
CACNA1A-257ENST00000638009 LAPTM4BQ86VI4 370 aa19.32■□□□□ 0.68
CACNA1A-257ENST00000638009 TMEM161BQ8NDZ6 487 aa19.32■□□□□ 0.68
CACNA1A-257ENST00000638009 FBXO25Q8TCJ0 367 aa19.32■□□□□ 0.68
CACNA1A-257ENST00000638009 SYT15Q9BQS2 421 aa19.32■□□□□ 0.68
CACNA1A-257ENST00000638009 TM9SF3Q9HD45 589 aa19.32■□□□□ 0.68
CACNA1A-257ENST00000638009 C19orf12Q9NSK7 152 aa19.32■□□□□ 0.68
CACNA1A-257ENST00000638009 WDR27A2RRH5 827 aa19.32■□□□□ 0.68
CACNA1A-257ENST00000638009 E7ENX8 843 aa19.32■□□□□ 0.68
CACNA1A-257ENST00000638009 TSHRP16473 764 aa19.32■□□□□ 0.68
CACNA1A-257ENST00000638009 APTXQ7Z2E3 356 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms