RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 ZBTB17Q13105 803 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 LLGL1Q15334 1064 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 TFDP3Q5H9I0 405 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 C11orf63Q6NUN7 778 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 GUSBP11Q6P575 273 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 SPOCD1Q6ZMY3 1216 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 NYAP1Q6ZVC0 841 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 TAF8Q7Z7C8 310 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 HEATR4Q86WZ0 1026 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 GAS2L3Q86XJ1 694 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 SLC35F3Q8IY50 421 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 RCOR2Q8IZ40 523 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 PELI3Q8N2H9 469 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 CBARPQ8N350 705 aaPredicted RBP13.79□□□□□ -0.2
PNKP-228ENST00000637325 NAT6Q93015 286 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 AP2M1Q96CW1 435 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 CALR3Q96L12 384 aaKnown RBP13.79□□□□□ -0.2
PNKP-228ENST00000637325 AGAP3Q96P47 875 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 DEPDC7Q96QD5 511 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 SMIM14Q96QK8 99 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 LGR4Q9BXB1 951 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 ADGRE3Q9BY15 652 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 CEP41Q9BYV8 373 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 SUDS3Q9H7L9 328 aaPredicted RBP13.79□□□□□ -0.2
PNKP-228ENST00000637325 FGF22Q9HCT0 170 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 PADI4Q9UM07 663 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 ADAMTS20P59510 1910 aa13.79□□□□□ -0.2
PNKP-228ENST00000637325 WDFY3Q8IZQ1 3526 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 PKD1L2Q7Z442 2459 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 A0A0U1RQS6 177 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 CAPN8A6NHC0 703 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 TAF4O00268 1085 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 CAPNS1P04632 268 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 TGM2P21980 687 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 SKOR1P84550 965 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 CDK3Q00526 305 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 PTSQ03393 145 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 IHHQ14623 411 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 B4GALNT4Q76KP1 1039 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 TECPR1Q7Z6L1 1165 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 NT5DC3Q86UY8 548 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 KATNAL2Q8IYT4 538 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 CNTD1Q8N815 330 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 ARL10Q8N8L6 244 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 DCBLD1Q8N8Z6 715 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 CCHCR1Q8TD31 782 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 TFB1MQ8WVM0 346 aaKnown RBP13.78□□□□□ -0.2
PNKP-228ENST00000637325 P3H4Q92791 437 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 RBM41Q96IZ5 413 aaKnown RBP13.78□□□□□ -0.2
PNKP-228ENST00000637325 OLFM3Q96PB7 478 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 RBM15Q96T37 977 aaKnown RBP eCLIP13.78□□□□□ -0.2
PNKP-228ENST00000637325 MLPHQ9BV36 600 aaPredicted RBP13.78□□□□□ -0.2
PNKP-228ENST00000637325 TEX101Q9BY14 249 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 NRSN2Q9GZP1 204 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 ABCG8Q9H221 673 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 SYNDIG1Q9H7V2 258 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 CARS2Q9HA77 564 aaKnown RBP13.78□□□□□ -0.2
PNKP-228ENST00000637325 DKK4Q9UBT3 224 aa13.78□□□□□ -0.2
PNKP-228ENST00000637325 C1orf232A0A0U1RR37 186 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 PRSS38A1L453 326 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 ANKRD66B4E2M5 251 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 CLDN7O95471 211 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 PRLP01236 227 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 PYGLP06737 847 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 MMP2P08253 660 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 TEAD1P28347 426 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 STC1P52823 247 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 DPTQ07507 201 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 TAZQ16635 292 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 QPCTQ16769 361 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 TEX44Q53QW1 395 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 CCDC181Q5TID7 509 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 FAM208BQ5VWN6 2430 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 CDCP2Q5VXM1 449 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 CCDC70Q6NSX1 233 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 DOK6Q6PKX4 331 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 RFLNAQ6ZTI6 216 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 KDELC2Q7Z4H8 507 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 KIAA1328Q86T90 577 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 NRSN1Q8IZ57 195 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 KYQ8NBH2 561 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 FAM46DQ8NEK8 389 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 EXD1Q8NHP7 514 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 BAG1Q99933 345 aaPredicted RBP13.77□□□□□ -0.21
PNKP-228ENST00000637325 TMEM168Q9H0V1 697 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 SLC25A51Q9H1U9 297 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 SAE1Q9UBE0 346 aaPredicted RBP13.77□□□□□ -0.21
PNKP-228ENST00000637325 FREM2Q5SZK8 3169 aa13.77□□□□□ -0.21
PNKP-228ENST00000637325 CSO75390 466 aaKnown RBP13.76□□□□□ -0.21
PNKP-228ENST00000637325 FECHP22830 423 aa13.76□□□□□ -0.21
PNKP-228ENST00000637325 GNPDA1P46926 289 aa13.76□□□□□ -0.21
PNKP-228ENST00000637325 GALNT3Q14435 633 aa13.76□□□□□ -0.21
PNKP-228ENST00000637325 PCSK7Q16549 785 aa13.76□□□□□ -0.21
PNKP-228ENST00000637325 PERM1Q5SV97 790 aa13.76□□□□□ -0.21
PNKP-228ENST00000637325 FAM182AQ5T1J6 154 aa13.76□□□□□ -0.21
PNKP-228ENST00000637325 KCTD16Q68DU8 428 aa13.76□□□□□ -0.21
PNKP-228ENST00000637325 RAD9BQ6WBX8 426 aa13.76□□□□□ -0.21
PNKP-228ENST00000637325 ZNF765Q7L2R6 523 aa13.76□□□□□ -0.21
PNKP-228ENST00000637325 SPC24Q8NBT2 197 aa13.76□□□□□ -0.21
PNKP-228ENST00000637325 OR6C4Q8NGE1 309 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms