RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 ADGRF1Q5T601 910 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 TMEM207Q6UWW9 146 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 TAS1R1Q7RTX1 841 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 NKAPQ8N5F7 415 aaKnown RBP12.11□□□□□ -0.47
CLN8-212ENST00000637083 OR13C4Q8NGS5 318 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 PIP4K2CQ8TBX8 421 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 USP13Q92995 863 aaPredicted RBP12.11□□□□□ -0.47
CLN8-212ENST00000637083 MYRFLQ96LU7 910 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 TDRD1Q9BXT4 1180 aaKnown RBP12.11□□□□□ -0.47
CLN8-212ENST00000637083 DERL2Q9GZP9 239 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 SUDS3Q9H7L9 328 aaPredicted RBP12.11□□□□□ -0.47
CLN8-212ENST00000637083 PFDN4Q9NQP4 134 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 AGO1Q9UL18 857 aaKnown RBP12.11□□□□□ -0.47
CLN8-212ENST00000637083 TBC1D30Q9Y2I9 924 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 COMMD10Q9Y6G5 202 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 GREB1Q4ZG55 1949 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 UBA6A0AVT1 1052 aaPredicted RBP12.11□□□□□ -0.47
CLN8-212ENST00000637083 TYW5A2RUC4 315 aaKnown RBP12.11□□□□□ -0.47
CLN8-212ENST00000637083 GOLGA8CPA6NN73 597 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 H3BNC9 293 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 TRIM38O00635 465 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 COCHO43405 550 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 VPS4BO75351 444 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 SRP72O76094 671 aaKnown RBP12.11□□□□□ -0.47
CLN8-212ENST00000637083 CR2P20023 1033 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 CD9P21926 228 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 TTPAP49638 278 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 ACADVLP49748 655 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 FASTKQ14296 549 aaKnown RBP12.11□□□□□ -0.47
CLN8-212ENST00000637083 UNC50Q53HI1 259 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 ZNF549Q6P9A3 640 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 EFL1Q7Z2Z2 1120 aaKnown RBP12.11□□□□□ -0.47
CLN8-212ENST00000637083 PDSS2Q86YH6 399 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 RYBPQ8N488 228 aaPredicted RBP12.11□□□□□ -0.47
CLN8-212ENST00000637083 HIPK4Q8NE63 616 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 OR52K2Q8NGK3 314 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 ZNF461Q8TAF7 563 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 RIN3Q8TB24 985 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 GDPD5Q8WTR4 605 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 TOP1MTQ969P6 601 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 KIAA1191Q96A73 305 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 MYEOVQ96EZ4 313 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 TRMT2BQ96GJ1 504 aaKnown RBP12.11□□□□□ -0.47
CLN8-212ENST00000637083 LRGUKQ96M69 825 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 PDP2Q9P2J9 529 aa12.11□□□□□ -0.47
CLN8-212ENST00000637083 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.1□□□□□ -0.47
CLN8-212ENST00000637083 LCHNA4D1U4 455 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 CARNS1A5YM72 827 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 KERAO60938 352 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 VPS26AO75436 327 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 STC2O76061 302 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 GJB5O95377 273 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 STAMBPO95630 424 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 CXCL10P02778 98 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 SNRPB2P08579 225 aaKnown RBP12.1□□□□□ -0.47
CLN8-212ENST00000637083 GFAPP14136 432 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 PSMD8P48556 350 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 ERFP50548 548 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 RPS24P62847 133 aaKnown RBP12.1□□□□□ -0.47
CLN8-212ENST00000637083 PTK2BQ14289 1009 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 TRIP10Q15642 601 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 TXNDC11Q6PKC3 985 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 HACD2Q6Y1H2 254 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 TMEM173Q86WV6 379 aaPredicted RBP12.1□□□□□ -0.47
CLN8-212ENST00000637083 KBTBD2Q8IY47 623 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 PTGR2Q8N8N7 351 aaPredicted RBP12.1□□□□□ -0.47
CLN8-212ENST00000637083 GATA6Q92908 595 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 SPDL1Q96EA4 605 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 BTBD9Q96Q07 612 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 MUC3BQ9H195 1237 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 UNC93B1Q9H1C4 597 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 BBIP1A8MTZ0 92 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 CBX4O00257 560 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 BCAS2O75934 225 aaPredicted RBP12.1□□□□□ -0.47
CLN8-212ENST00000637083 EFEMP2O95967 443 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 CDC25CP30307 473 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 PSME3P61289 254 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 MED21Q13503 144 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 SEMA3AQ14563 771 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 CYTH1Q15438 398 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 GEN1Q17RS7 908 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 INO80DQ53TQ3 878 aaPredicted RBP12.1□□□□□ -0.47
CLN8-212ENST00000637083 RARS2Q5T160 578 aaKnown RBP12.1□□□□□ -0.47
CLN8-212ENST00000637083 UGT3A1Q6NUS8 523 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 PIM3Q86V86 326 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 PQLC1Q8N2U9 271 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 PCYOX1LQ8NBM8 494 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 ICA1LQ8NDH6 482 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 OR4K2Q8NGD2 314 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 LPGAT1Q92604 370 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 PTERQ96BW5 349 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 C19orf60Q96EN9 201 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 TMA16Q96EY4 203 aaKnown RBP12.1□□□□□ -0.47
CLN8-212ENST00000637083 IGSF21Q96ID5 467 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 MARK4Q96L34 752 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 Q9H521 79 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 SARDHQ9UL12 918 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 RNF112Q9ULX5 631 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 RAI2Q9Y5P3 530 aa12.1□□□□□ -0.47
CLN8-212ENST00000637083 ANKRD66B4E2M5 251 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms