RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 PYGLP06737 847 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 MMP3P08254 477 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 CFC1BP0CG36 223 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 CFC1P0CG37 223 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 UNGP13051 313 aaPredicted RBP1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 VEGFAP15692 232 aaPredicted RBP1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 NAGAP17050 411 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 C21orf33P30042 268 aaPredicted RBP1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 GGT5P36269 586 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 CDK7P50613 346 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 MVDP53602 400 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 ARSFP54793 590 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 CDH15P55291 814 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 YWHAZP63104 245 aaKnown RBP1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 RPP30P78346 268 aaKnown RBP1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 CYP4A11Q02928 519 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 UBE3AQ05086 875 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 NEXNQ0ZGT2 675 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 TBL3Q12788 808 aaKnown RBP1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 DMP1Q13316 513 aaPredicted RBP1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 TRPC3Q13507 836 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 MYBPC2Q14324 1141 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 DHX8Q14562 1220 aaKnown RBP1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 KRT72Q14CN4 511 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 PPP2R5BQ15173 497 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 FCN2Q15485 313 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 TAF11Q15544 211 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 GPR68Q15743 365 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 SLC1A5Q15758 541 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 SLC18A3Q16572 532 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 ME3Q16798 604 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 FBXO47Q5MNV8 452 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 FAM69AQ5T7M9 428 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 TANGO2Q6ICL3 276 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 NAPEPLDQ6IQ20 393 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 DENND1BQ6P3S1 775 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 TMEM71Q6P5X7 295 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 CPLX2Q6PUV4 134 aaKnown RBP1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 MOB3CQ70IA8 216 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 ZNF771Q7L3S4 317 aaPredicted RBP1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 KDELC2Q7Z4H8 507 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 TADA2BQ86TJ2 420 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 GPAT4Q86UL3 456 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 EXOC8Q8IYI6 725 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 KIAA2013Q8IYS2 634 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 CLIP4Q8N3C7 705 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 CPXM2Q8N436 756 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 TCP11L2Q8N4U5 519 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 POC1AQ8NBT0 407 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 ENGASEQ8NFI3 743 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 MYRIPQ8NFW9 859 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 TNIP2Q8NFZ5 429 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 LILRB1Q8NHL6 650 aaPredicted RBP1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 SH3KBP1Q96B97 665 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 OTULINQ96BN8 352 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 SDCCAG3Q96C92 435 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 RNF183Q96D59 192 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 HVCN1Q96D96 273 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 MTBPQ96DY7 904 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 MASTLQ96GX5 879 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 SLC39A13Q96H72 371 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 MAELQ96JY0 434 aaKnown RBP1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 FRG2BQ96QU4 278 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 BBS4Q96RK4 519 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 YME1L1Q96TA2 773 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 EYA3Q99504 573 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 MPHOSPH8Q99549 860 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 WDR77Q9BQA1 342 aaPredicted RBP1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 REEP2Q9BRK0 252 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 FRMD8Q9BZ67 464 aaPredicted RBP1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 NPFFR1Q9GZQ6 430 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 TTYH1Q9H313 450 aaPredicted RBP1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 EPHX3Q9H6B9 360 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 MYH16Q9H6N6 1097 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 IL21RQ9HBE5 538 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 ZDHHC7Q9NXF8 308 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 GRHL1Q9NZI5 618 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 PEMTQ9UBM1 199 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 SEL1LQ9UBV2 794 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 MALT1Q9UDY8 824 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 GAB2Q9UQC2 676 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 SNX9Q9Y5X1 595 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 DGKBQ9Y6T7 804 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 SCN9AQ15858 1988 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 SLX4Q8IY92 1834 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 PHIPQ8WWQ0 1821 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 ZNF236Q9UL36 1845 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 RTEL1-TNFRSF6BF6WH68 1400 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 NAIPQ13075 1403 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 PTCH1Q13635 1447 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 TNS3Q68CZ2 1445 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 RRBP1Q9P2E9 1410 aaKnown RBP1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 KIAA1107Q9UPP5 1409 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 AFF2P51816 1311 aa1.15□□□□□ -2.23
SMARCB1-209ENST00000635578 COL2A1P02458 1487 aaPredicted RBP1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 C1orf167Q5SNV9 1468 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 RPRD2Q5VT52 1461 aaKnown RBP1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 CDK12Q9NYV4 1490 aaPredicted RBP1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 NRXN1Q9ULB1 1477 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 MSH6P52701 1360 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms