RNA–Protein interactions for RNA: ENST00000630543.2

NRXN1-233, Transcript of neurexin 1, human

TSL 5 BASIC

Gene NRXN1, Length 4,500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-233	ENST00000630543	ZBTB18	Q99592	522 aa		13.29	□□□□□ -0.28
NRXN1-233	ENST00000630543	RAD9A	Q99638	391 aa		13.29	□□□□□ -0.28
NRXN1-233	ENST00000630543	STOML1	Q9UBI4	398 aa		13.29	□□□□□ -0.28
NRXN1-233	ENST00000630543	ANGPTL2	Q9UKU9	493 aa		13.29	□□□□□ -0.28
NRXN1-233	ENST00000630543	INPP4B	O15327	924 aa		13.29	□□□□□ -0.28
NRXN1-233	ENST00000630543	MAP3K7	O43318	606 aa		13.29	□□□□□ -0.28
NRXN1-233	ENST00000630543	ZBTB14	O43829	449 aa		13.29	□□□□□ -0.28
NRXN1-233	ENST00000630543	GPM6B	Q13491	265 aa		13.29	□□□□□ -0.28
NRXN1-233	ENST00000630543	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
NRXN1-233	ENST00000630543	EMC10	Q5UCC4	262 aa		13.29	□□□□□ -0.28
NRXN1-233	ENST00000630543	CLEC6A	Q6EIG7	209 aa		13.29	□□□□□ -0.28
NRXN1-233	ENST00000630543		Q6ZVU0	165 aa		13.29	□□□□□ -0.28
NRXN1-233	ENST00000630543	UCMA	Q8WVF2	138 aa		13.29	□□□□□ -0.28
NRXN1-233	ENST00000630543	SH3KBP1	Q96B97	665 aa		13.29	□□□□□ -0.28
NRXN1-233	ENST00000630543	HGH1	Q9BTY7	390 aa		13.29	□□□□□ -0.28
NRXN1-233	ENST00000630543	HTATIP2	Q9BUP3	242 aa		13.29	□□□□□ -0.28
NRXN1-233	ENST00000630543	PAK6	Q9NQU5	681 aa	Predicted RBP	13.29	□□□□□ -0.28
NRXN1-233	ENST00000630543	ZNF510	Q9Y2H8	683 aa		13.29	□□□□□ -0.28
NRXN1-233	ENST00000630543	CCDC85C	A6NKD9	419 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	NR5A2	O00482	541 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	GRM6	O15303	877 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	HDAC3	O15379	428 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	DNAJC8	O75937	253 aa	Predicted RBP	13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	ATP6V1G2	O95670	118 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	PKM	P14618	531 aa	Known RBP	13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	RARS2	Q5T160	578 aa	Known RBP	13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	DOK6	Q6PKX4	331 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	ANGPTL8	Q6UXH0	198 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	APCDD1	Q8J025	514 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	PGBD3	Q8N328	593 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	SIDT2	Q8NBJ9	832 aa	Known RBP	13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	C7orf26	Q96N11	449 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	ZNF334	Q9HCZ1	680 aa	Predicted RBP	13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	TDP1	Q9NUW8	608 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	MARCH4	Q9P2E8	410 aa	Predicted RBP	13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	RAP2C	Q9Y3L5	183 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	ZNF197	O14709	1029 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	SLC9A3R1	O14745	358 aa	Predicted RBP	13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	NIPSNAP2	O75323	286 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	MSH3	P20585	1137 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	GTF2H3	Q13889	308 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	PIWIL4	Q7Z3Z4	852 aa	Known RBP	13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	FEM1A	Q9BSK4	669 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	CDH19	Q9H159	772 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	PKD2L2	Q9NZM6	624 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	CIDEB	Q9UHD4	219 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	IQCF5	A8MTL0	148 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	UBXN8	O00124	270 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	STK25	O00506	426 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	EEF1D	P29692	281 aa	Known RBP	13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	POLR2L	P62875	67 aa	Known RBP	13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	ZNF789	Q5FWF6	425 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	LY6G5C	Q5SRR4	150 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	KIAA0408	Q6ZU52	694 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	CPNE9	Q8IYJ1	553 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	KLHL32	Q96NJ5	620 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	NDE1	Q9NXR1	346 aa		13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.28	□□□□□ -0.28
NRXN1-233	ENST00000630543	ANKRD66	B4E2M5	251 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	ENTPD5	O75356	428 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	KLKB1	P03952	638 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	RHO	P08100	348 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	THRA	P10827	490 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	IGFBP4	P22692	258 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	BNIP1	Q12981	228 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	LRRC23	Q53EV4	343 aa	Predicted RBP	13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	ACVR1C	Q8NER5	493 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	ZNF398	Q8TD17	642 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	GPR22	Q99680	433 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	THG1L	Q9NWX6	298 aa	Known RBP	13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	DUS2	Q9NX74	493 aa	Known RBP	13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	SLCO1B7	G3V0H7	640 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	CES1	P23141	567 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	MAPK8	P45983	427 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	SGSH	P51688	502 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	AP2B1	P63010	937 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	TSN	Q15631	228 aa	Known RBP	13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	FUT11	Q495W5	492 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	TTC23L	Q6PF05	361 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	SCML4	Q8N228	414 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	METTL6	Q8TCB7	284 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	ZNF599	Q96NL3	588 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	HBEGF	Q99075	208 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	FNIP2	Q9P278	1114 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543		V9GYQ6	96 aa		13.27	□□□□□ -0.28
NRXN1-233	ENST00000630543	GRXCR1	A8MXD5	290 aa		13.27	□□□□□ -0.29
NRXN1-233	ENST00000630543	PRMT5	O14744	637 aa	Predicted RBP	13.27	□□□□□ -0.29
NRXN1-233	ENST00000630543	PEX11A	O75192	247 aa		13.27	□□□□□ -0.29
NRXN1-233	ENST00000630543	MAGEA6	P43360	314 aa		13.27	□□□□□ -0.29
NRXN1-233	ENST00000630543	IL1RL1	Q01638	556 aa		13.27	□□□□□ -0.29
NRXN1-233	ENST00000630543	MAPRE2	Q15555	327 aa		13.27	□□□□□ -0.29
NRXN1-233	ENST00000630543	SPRED3	Q2MJR0	410 aa		13.27	□□□□□ -0.29
NRXN1-233	ENST00000630543	STEAP4	Q687X5	459 aa		13.27	□□□□□ -0.29
NRXN1-233	ENST00000630543	ERAP2	Q6P179	960 aa		13.27	□□□□□ -0.29
NRXN1-233	ENST00000630543	PAQR3	Q6TCH7	311 aa		13.27	□□□□□ -0.29
NRXN1-233	ENST00000630543	RANBP10	Q6VN20	620 aa		13.27	□□□□□ -0.29
NRXN1-233	ENST00000630543	ZYG11A	Q6WRX3	759 aa		13.27	□□□□□ -0.29
NRXN1-233	ENST00000630543	ANKRD33	Q7Z3H0	272 aa		13.27	□□□□□ -0.29
NRXN1-233	ENST00000630543	SPNS2	Q8IVW8	549 aa		13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms