RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 PPM1FP49593 454 aaPredicted RBP20.1■□□□□ 0.81
TARDBP-228ENST00000629725 PAPOLAP51003 745 aaKnown RBP20.1■□□□□ 0.81
TARDBP-228ENST00000629725 GSCP56915 257 aaPredicted RBP20.1■□□□□ 0.81
TARDBP-228ENST00000629725 NSUN2Q08J23 767 aaKnown RBP eCLIP20.1■□□□□ 0.81
TARDBP-228ENST00000629725 KLRB1Q12918 225 aa20.1■□□□□ 0.81
TARDBP-228ENST00000629725 PTP4A2Q12974 167 aa20.1■□□□□ 0.81
TARDBP-228ENST00000629725 ATCAYQ86WG3 371 aa20.1■□□□□ 0.81
TARDBP-228ENST00000629725 UNC5BQ8IZJ1 945 aa20.1■□□□□ 0.81
TARDBP-228ENST00000629725 PTCD2Q8WV60 388 aaKnown RBP20.1■□□□□ 0.81
TARDBP-228ENST00000629725 AHCYL2Q96HN2 611 aaKnown RBP20.1■□□□□ 0.81
TARDBP-228ENST00000629725 SPRY4Q9C004 299 aa20.1■□□□□ 0.81
TARDBP-228ENST00000629725 KCTD5Q9NXV2 234 aa20.1■□□□□ 0.81
TARDBP-228ENST00000629725 ADAM22Q9P0K1 906 aa20.1■□□□□ 0.81
TARDBP-228ENST00000629725 B4GALT6Q9UBX8 382 aa20.1■□□□□ 0.81
TARDBP-228ENST00000629725 ARHGAP42A6NI28 874 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 CCP110O43303 1012 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 GADD45BO75293 160 aaPredicted RBP20.09■□□□□ 0.81
TARDBP-228ENST00000629725 UNGP13051 313 aaPredicted RBP20.09■□□□□ 0.81
TARDBP-228ENST00000629725 MAN1A1P33908 653 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 ADCY8P40145 1251 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 ACTR1BP42025 376 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 NSFP46459 744 aaKnown RBP20.09■□□□□ 0.81
TARDBP-228ENST00000629725 CD97P48960 835 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 SCNN1BP51168 640 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 TPI1P60174 286 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 ACTR1AP61163 376 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 CDK3Q00526 305 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 MC1RQ01726 317 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 ABHD18Q0P651 414 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 CAMK4Q16566 473 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 HSP90AA4PQ58FG1 418 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 DENND2CQ68D51 928 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 CEACAM20Q6UY09 585 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 TRIM72Q6ZMU5 477 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 KDELC2Q7Z4H8 507 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 MLKLQ8NB16 471 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 STARD8Q92502 1023 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 CTRCQ99895 268 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 SLC39A8Q9C0K1 460 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 PDP2Q9P2J9 529 aa20.09■□□□□ 0.81
TARDBP-228ENST00000629725 GOLGA6CA6NDK9 693 aa20.08■□□□□ 0.81
TARDBP-228ENST00000629725 GOLGA6BA6NDN3 693 aa20.08■□□□□ 0.81
TARDBP-228ENST00000629725 SIGLEC16A6NMB1 481 aa20.08■□□□□ 0.81
TARDBP-228ENST00000629725 MTSS1O43312 755 aa20.08■□□□□ 0.81
TARDBP-228ENST00000629725 GOLGA6DP0CG33 693 aa20.08■□□□□ 0.81
TARDBP-228ENST00000629725 HTR7P34969 479 aa20.08■□□□□ 0.81
TARDBP-228ENST00000629725 POLD2P49005 469 aa20.08■□□□□ 0.81
TARDBP-228ENST00000629725 ZNF143P52747 638 aaPredicted RBP20.08■□□□□ 0.81
TARDBP-228ENST00000629725 MC2RQ01718 297 aa20.08■□□□□ 0.81
TARDBP-228ENST00000629725 CNGA3Q16281 694 aa20.08■□□□□ 0.81
TARDBP-228ENST00000629725 SNAP47Q5SQN1 464 aa20.08■□□□□ 0.81
TARDBP-228ENST00000629725 TIPARPQ7Z3E1 657 aaKnown RBP20.08■□□□□ 0.81
TARDBP-228ENST00000629725 C3orf20Q8ND61 904 aa20.08■□□□□ 0.81
TARDBP-228ENST00000629725 SLC38A3Q99624 504 aa20.08■□□□□ 0.81
TARDBP-228ENST00000629725 ZPBPQ9BS86 351 aa20.08■□□□□ 0.81
TARDBP-228ENST00000629725 GOLGA6AQ9NYA3 693 aa20.08■□□□□ 0.81
TARDBP-228ENST00000629725 SLC17A4Q9Y2C5 497 aa20.08■□□□□ 0.81
TARDBP-228ENST00000629725 A8MU76 341 aa20.07■□□□□ 0.8
TARDBP-228ENST00000629725 IVLP07476 585 aa20.07■□□□□ 0.8
TARDBP-228ENST00000629725 TCN2P20062 427 aa20.07■□□□□ 0.8
TARDBP-228ENST00000629725 ETV3P41162 512 aa20.07■□□□□ 0.8
TARDBP-228ENST00000629725 RFTN1Q14699 578 aaPredicted RBP20.07■□□□□ 0.8
TARDBP-228ENST00000629725 CRTC2Q53ET0 693 aaPredicted RBP20.07■□□□□ 0.8
TARDBP-228ENST00000629725 RAET1GQ6H3X3 334 aa20.07■□□□□ 0.8
TARDBP-228ENST00000629725 C16orf46Q6P387 395 aa20.07■□□□□ 0.8
TARDBP-228ENST00000629725 ZNF761Q86XN6 746 aaPredicted RBP20.07■□□□□ 0.8
TARDBP-228ENST00000629725 OR10G6Q8NH81 332 aa20.07■□□□□ 0.8
TARDBP-228ENST00000629725 DTD2Q96FN9 168 aa20.07■□□□□ 0.8
TARDBP-228ENST00000629725 TRIT1Q9H3H1 467 aaKnown RBP20.07■□□□□ 0.8
TARDBP-228ENST00000629725 SP110Q9HB58 689 aa20.07■□□□□ 0.8
TARDBP-228ENST00000629725 FBXO8Q9NRD0 319 aa20.07■□□□□ 0.8
TARDBP-228ENST00000629725 TP53TG5Q9Y2B4 290 aa20.07■□□□□ 0.8
TARDBP-228ENST00000629725 ANKRD62A6NC57 917 aa20.06■□□□□ 0.8
TARDBP-228ENST00000629725 STK17BO94768 372 aa20.06■□□□□ 0.8
TARDBP-228ENST00000629725 HEXIM1O94992 359 aaKnown RBP20.06■□□□□ 0.8
TARDBP-228ENST00000629725 CALB1P05937 261 aa20.06■□□□□ 0.8
TARDBP-228ENST00000629725 FASLGP48023 281 aa20.06■□□□□ 0.8
TARDBP-228ENST00000629725 MLLT10P55197 1068 aa20.06■□□□□ 0.8
TARDBP-228ENST00000629725 AP1S1P61966 158 aa20.06■□□□□ 0.8
TARDBP-228ENST00000629725 ATP1A1-AS1Q5TC04 95 aa20.06■□□□□ 0.8
TARDBP-228ENST00000629725 WDR74Q6RFH5 385 aaPredicted RBP20.06■□□□□ 0.8
TARDBP-228ENST00000629725 TEX19Q8NA77 164 aa20.06■□□□□ 0.8
TARDBP-228ENST00000629725 SPOCK2Q92563 424 aa20.06■□□□□ 0.8
TARDBP-228ENST00000629725 NSMCE3Q96MG7 304 aa20.06■□□□□ 0.8
TARDBP-228ENST00000629725 PLEKHM1Q9Y4G2 1056 aa20.06■□□□□ 0.8
TARDBP-228ENST00000629725 TMEM184BQ9Y519 407 aaPredicted RBP20.06■□□□□ 0.8
TARDBP-228ENST00000629725 KCTD3Q9Y597 815 aa20.06■□□□□ 0.8
TARDBP-228ENST00000629725 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.05■□□□□ 0.8
TARDBP-228ENST00000629725 KRT7P08729 469 aa20.05■□□□□ 0.8
TARDBP-228ENST00000629725 NFKBIAP25963 317 aa20.05■□□□□ 0.8
TARDBP-228ENST00000629725 VIPR1P32241 457 aa20.05■□□□□ 0.8
TARDBP-228ENST00000629725 SOX5P35711 763 aa20.05■□□□□ 0.8
TARDBP-228ENST00000629725 NOP2P46087 812 aaKnown RBP20.05■□□□□ 0.8
TARDBP-228ENST00000629725 COPB1P53618 953 aaKnown RBP20.05■□□□□ 0.8
TARDBP-228ENST00000629725 BECN1Q14457 450 aa20.05■□□□□ 0.8
TARDBP-228ENST00000629725 HIST2H2BCQ6DN03 193 aa20.05■□□□□ 0.8
TARDBP-228ENST00000629725 DOK6Q6PKX4 331 aa20.05■□□□□ 0.8
TARDBP-228ENST00000629725 ARHGAP22Q7Z5H3 698 aa20.05■□□□□ 0.8
TARDBP-228ENST00000629725 HSD11B1LQ7Z5J1 315 aa20.05■□□□□ 0.8
TARDBP-228ENST00000629725 PHF13Q86YI8 300 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms