RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 SLCO4C1Q6ZQN7 724 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 PIWIL1Q96J94 861 aaKnown RBP4.92□□□□□ -1.62
LINC00550-201ENST00000629293 CNDP2Q96KP4 475 aaKnown RBP4.92□□□□□ -1.62
LINC00550-201ENST00000629293 FCRL3Q96P31 734 aaPredicted RBP4.92□□□□□ -1.62
LINC00550-201ENST00000629293 PSMG3-AS1Q96PY0 264 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 CDK5RAP1Q96SZ6 601 aaKnown RBP4.92□□□□□ -1.62
LINC00550-201ENST00000629293 SMAD5Q99717 465 aaKnown RBP4.92□□□□□ -1.62
LINC00550-201ENST00000629293 TRIM51Q9BSJ1 452 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 RAB17Q9H0T7 212 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 PRSS16Q9NQE7 514 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 COMMD8Q9NX08 183 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 CLIC5Q9NZA1 410 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 RSPH14Q9UHP6 348 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 SLC12A6Q9UHW9 1150 aa4.92□□□□□ -1.62
LINC00550-201ENST00000629293 TYW5A2RUC4 315 aaKnown RBP4.91□□□□□ -1.62
LINC00550-201ENST00000629293 IFRD1O00458 451 aaPredicted RBP4.91□□□□□ -1.62
LINC00550-201ENST00000629293 RRP8O43159 456 aaKnown RBP4.91□□□□□ -1.62
LINC00550-201ENST00000629293 CRTAMO95727 393 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 LDOC1O95751 146 aaPredicted RBP4.91□□□□□ -1.62
LINC00550-201ENST00000629293 CD27P26842 260 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 LSP1P33241 339 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 CTNNA1P35221 906 aaKnown RBP4.91□□□□□ -1.62
LINC00550-201ENST00000629293 BNIP3Q12983 259 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 AUHQ13825 339 aaKnown RBP4.91□□□□□ -1.62
LINC00550-201ENST00000629293 SIX1Q15475 284 aaPredicted RBP4.91□□□□□ -1.62
LINC00550-201ENST00000629293 DNAJC21Q5F1R6 531 aaKnown RBP4.91□□□□□ -1.62
LINC00550-201ENST00000629293 CEP85LQ5SZL2 805 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 HES3Q5TGS1 186 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 KRT39Q6A163 491 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 KLHDC10Q6PID8 442 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 MAMDC2Q7Z304 686 aaPredicted RBP4.91□□□□□ -1.62
LINC00550-201ENST00000629293 ZNF605Q86T29 641 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 SLC47A2Q86VL8 602 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 ARHGAP18Q8N392 663 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 PRELID2Q8N945 189 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 KLK6Q92876 244 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 IGSF8Q969P0 613 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 TMEM176AQ96HP8 235 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 LGMNQ99538 433 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 ERP44Q9BS26 406 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 IFT22Q9H7X7 185 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 GRHL1Q9NZI5 618 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 PCYOX1Q9UHG3 505 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 SLCO3A1Q9UIG8 710 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 CA5BQ9Y2D0 317 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 UTP11Q9Y3A2 253 aaKnown RBP4.91□□□□□ -1.62
LINC00550-201ENST00000629293 RAI2Q9Y5P3 530 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 RP1P56715 2156 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 GOLGA6L10A0A0M3HER8 536 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 MEGF11A6BM72 1044 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 TTC34A8MYJ7 566 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 FFAR2O15552 330 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 CPP00450 1065 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 MMEP08473 750 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 PAEPP09466 180 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 NUDT17P0C025 328 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 CYP11B1P15538 503 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 COMTP21964 271 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 SLC8A1P32418 973 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 MDH1P40925 334 aaKnown RBP4.91□□□□□ -1.62
LINC00550-201ENST00000629293 CSKP41240 450 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 CCT5P48643 541 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 ARRB1P49407 418 aaPredicted RBP4.91□□□□□ -1.62
LINC00550-201ENST00000629293 RPS14P62263 151 aaKnown RBP4.91□□□□□ -1.62
LINC00550-201ENST00000629293 CXADRP78310 365 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 DR1Q01658 176 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 CDR2Q01850 454 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 SGO2Q562F6 1265 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 ADGRF1Q5T601 910 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 NAA35Q5VZE5 725 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 TTC27Q6P3X3 843 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 C11orf96Q7Z7L8 435 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 KIF18BQ86Y91 864 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 SLC4A11Q8NBS3 891 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 FBXL13Q8NEE6 735 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 OR2W6PQ8NHA6 318 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 BCAS4Q8TDM0 211 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 SKA1Q96BD8 255 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 TLCD1Q96CP7 247 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 ELF4Q99607 663 aaPredicted RBP4.91□□□□□ -1.62
LINC00550-201ENST00000629293 MENTQ9BUN1 341 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 CYP3A43Q9HB55 503 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 SEPT11Q9NVA2 429 aaKnown RBP4.91□□□□□ -1.62
LINC00550-201ENST00000629293 CTTNBP2NLQ9P2B4 639 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 GMPR2Q9P2T1 348 aaKnown RBP4.91□□□□□ -1.62
LINC00550-201ENST00000629293 UVRAGQ9P2Y5 699 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 FBXO10Q9UK96 956 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 DOCK9Q9BZ29 2069 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 PRRC2CQ9Y520 2896 aaKnown RBP4.91□□□□□ -1.62
LINC00550-201ENST00000629293 LRRC72A6NJI9 287 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 CAPN9O14815 690 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 WNT9AO14904 365 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 NPC1O15118 1278 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 TIMM44O43615 452 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 MYZAPP0CAP1 466 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 MYF5P13349 255 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 VAV1P15498 845 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 CHRNA3P32297 505 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 SLC11A2P49281 568 aa4.91□□□□□ -1.62
LINC00550-201ENST00000629293 STK19P49842 368 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms