RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 PTPRN2Q92932 1015 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 PEX13Q92968 403 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 MTBPQ96DY7 904 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 CHFRQ96EP1 664 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 RBBP8Q99708 897 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 HEPHQ9BQS7 1158 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 FAM167BQ9BTA0 163 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 CAPS2Q9BXY5 557 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 MTG2Q9H4K7 406 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 SUV39H2Q9H5I1 410 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 SUDS3Q9H7L9 328 aaPredicted RBP9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 BRD9Q9H8M2 597 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 NLE1Q9NVX2 485 aaPredicted RBP9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 NSMCE4AQ9NXX6 385 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 HACD3Q9P035 362 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 RPL26L1Q9UNX3 145 aaKnown RBP9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 PLA2G4CQ9UP65 541 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 ZNF711Q9Y462 761 aa9.95□□□□□ -0.82
SOX2-OT-244ENST00000627738 A0A0J9YYE9 177 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 A0A0U1RQS6 177 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 CCDC162PA2VCL2 907 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 OR51F1A6NGY5 319 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 ANHXE9PGG2 379 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 ARNTLO00327 626 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 SLC7A4O43246 635 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 TIMM44O43615 452 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 RFPL1O75677 317 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 KAT7O95251 611 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 GOT2P00505 430 aaKnown RBP9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 TRBC1P01850 177 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 AHSGP02765 367 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 TIMP2P16035 220 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 LPOP22079 712 aaPredicted RBP9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 KCNA5P22460 613 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 GABRB3P28472 473 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 SPRP35270 261 aaPredicted RBP9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 EIF2DP41214 584 aaKnown RBP9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 SLC1A2P43004 574 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 ABCG1P45844 678 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 LIMK2P53671 638 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 RELBQ01201 579 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 SLC18A2Q05940 514 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 CTBP1Q13363 440 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 MPP2Q14168 576 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 EIF4HQ15056 248 aaKnown RBP9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 AAK1Q2M2I8 961 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 FNDC3BQ53EP0 1204 aaKnown RBP9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 GDPD4Q6W3E5 623 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 TIFABQ6ZNK6 161 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 SH2D5Q6ZV89 423 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 C2CD4AQ8NCU7 369 aaPredicted RBP9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 OR4K2Q8NGD2 314 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 GRIN3AQ8TCU5 1115 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 CALML6Q8TD86 181 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 MGARPQ8TDB4 240 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 UCMAQ8WVF2 138 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 ALKBH8Q96BT7 664 aaKnown RBP9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 ECHDC3Q96DC8 303 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 ATXN7L3BQ96GX2 97 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 CDKN2AIPNLQ96HQ2 116 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 ZNF641Q96N77 438 aaPredicted RBP9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 KLHL32Q96NJ5 620 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 MCMBPQ9BTE3 642 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 GPR63Q9BZJ6 419 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 MFSD1Q9H3U5 465 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 MAGEE1Q9HCI5 957 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 BPIFA1Q9NP55 256 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 POLR3BQ9NW08 1133 aaPredicted RBP9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 PHTF1Q9UMS5 762 aa9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 SMG5Q9UPR3 1016 aaKnown RBP9.94□□□□□ -0.82
SOX2-OT-244ENST00000627738 SPTBN5Q9NRC6 3674 aaKnown RBP9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 SZT2Q5T011 3432 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 A0A1W2PQ67 120 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 ANTXRLA6NF34 631 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 CAPN8A6NHC0 703 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 FAM47DPA6NHR8 397 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 TMEM229AB2RXF0 380 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 C2CD4DB7Z1M9 353 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 MEN1O00255 615 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 TPP1O14773 563 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 STX7O15400 261 aaKnown RBP9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 PRPF4O43172 522 aaKnown RBP eCLIP9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 MBTPS2O43462 519 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 TYROBPO43914 113 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 LEFTY1O75610 366 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 APODP05090 189 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 CTSLP07711 333 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 HLA-EP13747 358 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 PSMA3P25788 255 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 HNF1BP35680 557 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 SOX9P48436 509 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 CD151P48509 253 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 GNGT1P63211 74 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 PDE1BQ01064 536 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 DNAJC3Q13217 504 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 SMAD4Q13485 552 aaKnown RBP9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 ZNF234Q14588 700 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 LRRC14Q15048 493 aa9.93□□□□□ -0.82
SOX2-OT-244ENST00000627738 UGP2Q16851 508 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms