RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 SRPK1Q96SB4 655 aaKnown RBP14.73□□□□□ -0.05
PNKP-221ENST00000627317 C1QTNF7Q9BXJ2 289 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 DMTF1Q9Y222 760 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 ANKRD6Q9Y2G4 727 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 SNX11Q9Y5W9 270 aa14.73□□□□□ -0.05
PNKP-221ENST00000627317 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.72□□□□□ -0.05
PNKP-221ENST00000627317 VILLO15195 856 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 SLC31A1O15431 190 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 CBFA2T3O75081 653 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 ZNF30P17039 623 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 LHCGRP22888 699 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 AKT2P31751 481 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 PTGIRP43119 386 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 CTSKP43235 329 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 TERF1P54274 439 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 SHC2P98077 582 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 PTK6Q13882 451 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 ACOX1Q15067 660 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 LRRC66Q68CR7 880 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 DENND2CQ68D51 928 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 CRTC1Q6UUV9 634 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 IL27RAQ6UWB1 636 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 RANBP10Q6VN20 620 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 DBX2Q6ZNG2 339 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 LINC00523Q86TU6 105 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 JAMLQ86YT9 394 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 SERAC1Q96JX3 654 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 LYSMD1Q96S90 227 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 SLC17A9Q9BYT1 436 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 GAREM1Q9H706 876 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 EIF2B3Q9NR50 452 aaKnown RBP14.72□□□□□ -0.05
PNKP-221ENST00000627317 COQ6Q9Y2Z9 468 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 NEU2Q9Y3R4 380 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 ZNF711Q9Y462 761 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 ADAMTS9Q9P2N4 1935 aa14.72□□□□□ -0.05
PNKP-221ENST00000627317 PSMD11O00231 422 aa14.71□□□□□ -0.05
PNKP-221ENST00000627317 TTI1O43156 1089 aa14.71□□□□□ -0.05
PNKP-221ENST00000627317 CER1O95813 267 aa14.71□□□□□ -0.05
PNKP-221ENST00000627317 HNRNPA2B1P22626 353 aaKnown RBP14.71□□□□□ -0.05
PNKP-221ENST00000627317 ADCY8P40145 1251 aa14.71□□□□□ -0.05
PNKP-221ENST00000627317 TEAD4Q15561 434 aa14.71□□□□□ -0.05
PNKP-221ENST00000627317 ZNF423Q2M1K9 1284 aa14.71□□□□□ -0.05
PNKP-221ENST00000627317 LYSMD3Q7Z3D4 306 aa14.71□□□□□ -0.05
PNKP-221ENST00000627317 DNAAF3Q8N9W5 541 aa14.71□□□□□ -0.05
PNKP-221ENST00000627317 BAHD1Q8TBE0 780 aaPredicted RBP14.71□□□□□ -0.05
PNKP-221ENST00000627317 BLOC1S5Q8TDH9 187 aa14.71□□□□□ -0.05
PNKP-221ENST00000627317 MYOCQ99972 504 aa14.71□□□□□ -0.05
PNKP-221ENST00000627317 C1QTNF2Q9BXJ5 285 aa14.71□□□□□ -0.05
PNKP-221ENST00000627317 GPR63Q9BZJ6 419 aa14.71□□□□□ -0.05
PNKP-221ENST00000627317 TRABDQ9H4I3 376 aa14.71□□□□□ -0.05
PNKP-221ENST00000627317 MAGEE1Q9HCI5 957 aa14.71□□□□□ -0.05
PNKP-221ENST00000627317 FZD3Q9NPG1 666 aa14.71□□□□□ -0.05
PNKP-221ENST00000627317 HACD3Q9P035 362 aa14.71□□□□□ -0.05
PNKP-221ENST00000627317 SHOC2Q9UQ13 582 aa14.71□□□□□ -0.05
PNKP-221ENST00000627317 AKAP13Q12802 2813 aa14.71□□□□□ -0.05
PNKP-221ENST00000627317 PLXNA2O75051 1894 aa14.71□□□□□ -0.05
PNKP-221ENST00000627317 A0A0U1RQS6 177 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 GOLGA8CPA6NN73 597 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 PRAMEF26H0Y7S4 382 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 RECQL5O94762 991 aaPredicted RBP14.7□□□□□ -0.06
PNKP-221ENST00000627317 SUN1O94901 812 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 CLDN7O95471 211 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 PAK4O96013 591 aaPredicted RBP14.7□□□□□ -0.06
PNKP-221ENST00000627317 TPSB2P20231 275 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 KCNA4P22459 653 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 STC1P52823 247 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 CDK16Q00536 496 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 FGL2Q14314 439 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 TPSAB1Q15661 275 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 GLT6D1Q7Z4J2 308 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 MAATS1Q7Z4T9 603 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 NAXDQ8IW45 347 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 TMEM145Q8NBT3 493 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 DENND6BQ8NEG7 585 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 ASB12Q8WXK4 309 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 NUS1Q96E22 293 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 CAMK1GQ96NX5 476 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 TRIM51Q9BSJ1 452 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 ZFYVE1Q9HBF4 777 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 ARNT2Q9HBZ2 717 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 AASDHPPTQ9NRN7 309 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 PKD2L2Q9NZM6 624 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 PCDHGB2Q9Y5G2 931 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 SPO11Q9Y5K1 396 aa14.7□□□□□ -0.06
PNKP-221ENST00000627317 CTAGE15A4D2H0 777 aa14.69□□□□□ -0.06
PNKP-221ENST00000627317 FAM187AA6NFU0 413 aa14.69□□□□□ -0.06
PNKP-221ENST00000627317 H0Y8X5 98 aa14.69□□□□□ -0.06
PNKP-221ENST00000627317 SH3BP5O60239 455 aa14.69□□□□□ -0.06
PNKP-221ENST00000627317 C1SP09871 688 aa14.69□□□□□ -0.06
PNKP-221ENST00000627317 CTAGE8P0CG41 777 aa14.69□□□□□ -0.06
PNKP-221ENST00000627317 SARNPP82979 210 aaKnown RBP14.69□□□□□ -0.06
PNKP-221ENST00000627317 CDH17Q12864 832 aa14.69□□□□□ -0.06
PNKP-221ENST00000627317 SEPT6Q14141 434 aa14.69□□□□□ -0.06
PNKP-221ENST00000627317 KCNJ11Q14654 390 aa14.69□□□□□ -0.06
PNKP-221ENST00000627317 SHBQ15464 509 aa14.69□□□□□ -0.06
PNKP-221ENST00000627317 DENND5AQ6IQ26 1287 aa14.69□□□□□ -0.06
PNKP-221ENST00000627317 HSD11B1LQ7Z5J1 315 aa14.69□□□□□ -0.06
PNKP-221ENST00000627317 CTAGE6Q86UF2 777 aa14.69□□□□□ -0.06
PNKP-221ENST00000627317 CTAGE4Q8IX94 777 aa14.69□□□□□ -0.06
PNKP-221ENST00000627317 CEP112Q8N8E3 955 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms