RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 FFAR2O15552 330 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 GCATO75600 419 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 TNFP01375 233 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 EPOP01588 193 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 PCCBP05166 539 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 CTNNA2P26232 953 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 ETV3P41162 512 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 STC1P52823 247 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 GSDMDP57764 484 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 SKOR1P84550 965 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 PTSQ03393 145 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 PEX6Q13608 980 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 LRRC66Q68CR7 880 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 ENPP7Q6UWV6 458 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 ADAMTSL4Q6UY14 1074 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 RAD9BQ6WBX8 426 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 SYCE1Q8N0S2 351 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 RBFAQ8N0V3 343 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 DCBLD1Q8N8Z6 715 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 PLA2G15Q8NCC3 412 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 TEKT5Q96M29 485 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 TRIB3Q96RU7 358 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 NRSN2Q9GZP1 204 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 NFKBIL1Q9UBC1 381 aaPredicted RBP12.43□□□□□ -0.42
LINC00963-217ENST00000624009 HYOU1Q9Y4L1 999 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 TTLL3Q9Y4R7 772 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 OR1A2Q9Y585 309 aa12.43□□□□□ -0.42
LINC00963-217ENST00000624009 COL27A1Q8IZC6 1860 aaPredicted RBP12.42□□□□□ -0.42
LINC00963-217ENST00000624009 RCCD1A6NED2 376 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 GOLGA8CPA6NN73 597 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 MIF4GDA9UHW6 222 aaKnown RBP12.42□□□□□ -0.42
LINC00963-217ENST00000624009 YY2O15391 372 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 CTSEP14091 401 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 JUPP14923 745 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 PTPN3P26045 913 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 CETN2P41208 172 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 CD86P42081 329 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 RWDD2BP57060 319 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 CDK3Q00526 305 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 SEMG2Q02383 582 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 KIF5AQ12840 1032 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 NR0B2Q15466 257 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 CDKN3Q16667 212 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 HES3Q5TGS1 186 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 CDCP2Q5VXM1 449 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 Q6ZVL8 140 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 HSD11B1LQ7Z5J1 315 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 HID1Q8IV36 788 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 RNF10Q8N5U6 811 aaKnown RBP12.42□□□□□ -0.42
LINC00963-217ENST00000624009 ARL10Q8N8L6 244 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 CCHCR1Q8TD31 782 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 SCARF2Q96GP6 870 aaPredicted RBP12.42□□□□□ -0.42
LINC00963-217ENST00000624009 QKIQ96PU8 341 aaKnown RBP eCLIP12.42□□□□□ -0.42
LINC00963-217ENST00000624009 FERMT1Q9BQL6 677 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 MLPHQ9BV36 600 aaPredicted RBP12.42□□□□□ -0.42
LINC00963-217ENST00000624009 LACRTQ9GZZ8 138 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 CLPBQ9H078 707 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 TCEAL2Q9H3H9 227 aaPredicted RBP12.42□□□□□ -0.42
LINC00963-217ENST00000624009 GLOD4Q9HC38 313 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 MAGEE1Q9HCI5 957 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 RAD18Q9NS91 495 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 TRNAU1APQ9NX07 287 aaKnown RBP12.42□□□□□ -0.42
LINC00963-217ENST00000624009 TRHDEQ9UKU6 1024 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 CHKBQ9Y259 395 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 SLC17A4Q9Y2C5 497 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 NBEAQ8NFP9 2946 aa12.42□□□□□ -0.42
LINC00963-217ENST00000624009 ZFHX4Q86UP3 3567 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 PRSS38A1L453 326 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 TMEM202A6NGA9 273 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 OPA1O60313 960 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 TCEA3O75764 348 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 IVLP07476 585 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 TNNT1P13805 278 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 NAP1L1P55209 391 aaKnown RBP12.41□□□□□ -0.42
LINC00963-217ENST00000624009 DCDC1P59894 354 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 DYNLT1P63172 113 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 INSM1Q01101 510 aaPredicted RBP12.41□□□□□ -0.42
LINC00963-217ENST00000624009 CDK18Q07002 472 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 QPCTQ16769 361 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 DEFB133Q30KQ1 61 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 OGFOD3Q6PK18 319 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 NPNTQ6UXI9 565 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 KDM7AQ6ZMT4 941 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 KIAA1328Q86T90 577 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 TSPAN33Q86UF1 283 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 HEATR4Q86WZ0 1026 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 PROSER1Q86XN7 944 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 CCDC50Q8IVM0 306 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 LPCAT1Q8NF37 534 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 DTX3LQ8TDB6 740 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 KRT35Q92764 455 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 TSACCQ96A04 125 aaPredicted RBP12.41□□□□□ -0.42
LINC00963-217ENST00000624009 AP2M1Q96CW1 435 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 NXPE2Q96DL1 559 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 PDXPQ96GD0 296 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 FRMD8Q9BZ67 464 aaPredicted RBP12.41□□□□□ -0.42
LINC00963-217ENST00000624009 GOLPH3Q9H4A6 298 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 CCDC86Q9H6F5 360 aaKnown RBP12.41□□□□□ -0.42
LINC00963-217ENST00000624009 FGF22Q9HCT0 170 aa12.41□□□□□ -0.42
LINC00963-217ENST00000624009 DOLKQ9UPQ8 538 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms