RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 PSMD10O75832 226 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 FABP3P05413 133 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 FGFR1P11362 822 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 TGM3Q08188 693 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 E2F2Q14209 437 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 ZNF517Q6ZMY9 492 aaPredicted RBP8.91□□□□□ -0.98
VCL-206ENST00000623461 KRT77Q7Z794 578 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 TAF8Q7Z7C8 310 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 C10orf53Q8N6V4 93 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 C9orf43Q8TAL5 461 aaPredicted RBP8.91□□□□□ -0.98
VCL-206ENST00000623461 CRELD1Q96HD1 420 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 FBXO5Q9UKT4 447 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 H0YJX3 145 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 RFXANKO14593 260 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 AP2A2O94973 939 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 GLDCP23378 1020 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 CTSKP43235 329 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 GPD2P43304 727 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 MAPK12P53778 367 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 HMGCS2P54868 508 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 AIF1P55008 147 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 ST8SIA6P61647 398 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 RPL38P63173 70 aaKnown RBP8.91□□□□□ -0.98
VCL-206ENST00000623461 DAG1Q14118 895 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 SIPA1Q96FS4 1042 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 TAS2R7Q9NYW3 318 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 ST3GAL5Q9UNP4 418 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 TMX2Q9Y320 296 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 OR6C70A6NIJ9 312 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 NPM3O75607 178 aaKnown RBP8.9□□□□□ -0.98
VCL-206ENST00000623461 PAX3P23760 479 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 CRY1Q16526 586 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 ZACNQ401N2 412 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 AFTPHQ6ULP2 937 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 AHSA2Q719I0 299 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 C11orf96Q7Z7L8 435 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 OR52L1Q8NGH7 329 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 HDAC10Q969S8 669 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 C1GALT1C1Q96EU7 318 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 C12orf65Q9H3J6 166 aaKnown RBP8.9□□□□□ -0.98
VCL-206ENST00000623461 PAK6Q9NQU5 681 aaPredicted RBP8.9□□□□□ -0.98
VCL-206ENST00000623461 STOX2Q9P2F5 926 aaPredicted RBP8.9□□□□□ -0.98
VCL-206ENST00000623461 RCOR3Q9P2K3 495 aaPredicted RBP8.9□□□□□ -0.98
VCL-206ENST00000623461 NFKBIL1Q9UBC1 381 aaPredicted RBP8.9□□□□□ -0.98
VCL-206ENST00000623461 ZNF70Q9UC06 446 aaPredicted RBP8.9□□□□□ -0.98
VCL-206ENST00000623461 DHRS7Q9Y394 339 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 SPEF2Q9C093 1822 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 ATP6AP2A0A1C7CYW4 349 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 FAM149AA5PLN7 773 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 FABP12A6NFH5 140 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 TOR1BO14657 336 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 KPNA5O15131 536 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 ATP6AP2O75787 350 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 METTL18O95568 372 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 ANXA5P08758 320 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 OR56A5P0C7T3 313 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 MMP8P22894 467 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 FBXO43Q4G163 708 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 OVOS1Q6IE37 1185 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 ZNF773Q6PK81 442 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 GALNT5Q7Z7M9 940 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 ZNF512Q96ME7 567 aaPredicted RBP8.9□□□□□ -0.98
VCL-206ENST00000623461 TLR8Q9NR97 1041 aaKnown RBP8.9□□□□□ -0.98
VCL-206ENST00000623461 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.9□□□□□ -0.98
VCL-206ENST00000623461 PRAMEF33A0A0G2JMD5 474 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 OR14I1A6ND48 311 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 PRAMEF10O60809 474 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 RAMP2O60895 175 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 SLC9A3P48764 834 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 FUT2Q10981 343 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 ASCC1Q8N9N2 400 aaKnown RBP8.9□□□□□ -0.98
VCL-206ENST00000623461 TMIEQ8NEW7 156 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 CPB2Q96IY4 423 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 HSFY1Q96LI6 401 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 NLNQ9BYT8 704 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 GDAP2Q9NXN4 497 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 AASSQ9UDR5 926 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 ABCG2Q9UNQ0 655 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 A0A0G2JPF8 293 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 HNRNPCL3B7ZW38 293 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 DENRO43583 198 aaKnown RBP8.9□□□□□ -0.98
VCL-206ENST00000623461 SGTAO43765 313 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 HNRNPCL4P0DMR1 293 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 TUBP50607 506 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 CCNIQ14094 377 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 ARSHQ5FYA8 562 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.9□□□□□ -0.98
VCL-206ENST00000623461 HAVCR1Q96D42 359 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 KREMEN1Q96MU8 473 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 VWA7Q9Y334 891 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 NR2E1Q9Y466 385 aa8.9□□□□□ -0.98
VCL-206ENST00000623461 A0A0J9YVX5 310 aa8.9□□□□□ -0.99
VCL-206ENST00000623461 PGLSO95336 258 aa8.9□□□□□ -0.99
VCL-206ENST00000623461 PRG2P13727 222 aa8.9□□□□□ -0.99
VCL-206ENST00000623461 NR4A1P22736 598 aa8.9□□□□□ -0.99
VCL-206ENST00000623461 SIM2Q14190 667 aaPredicted RBP8.9□□□□□ -0.99
VCL-206ENST00000623461 ALFQ53S48 1182 aa8.9□□□□□ -0.99
VCL-206ENST00000623461 IL23RQ5VWK5 629 aa8.9□□□□□ -0.99
VCL-206ENST00000623461 TTC29Q8NA56 475 aaPredicted RBP8.9□□□□□ -0.99
VCL-206ENST00000623461 SLC4A11Q8NBS3 891 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms