RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 ACTL7AQ9Y615 435 aa16.34■□□□□ 0.21
LDB3-208ENST00000623007 A0A0J9YYE9 177 aa16.33■□□□□ 0.2
LDB3-208ENST00000623007 LCHNA4D1U4 455 aa16.33■□□□□ 0.2
LDB3-208ENST00000623007 TRPC5OSA6NMA1 111 aa16.33■□□□□ 0.2
LDB3-208ENST00000623007 SYCE1LA8MT33 242 aa16.33■□□□□ 0.2
LDB3-208ENST00000623007 HDAC3O15379 428 aa16.33■□□□□ 0.2
LDB3-208ENST00000623007 ITM2AO43736 263 aa16.33■□□□□ 0.2
LDB3-208ENST00000623007 GJB3O75712 270 aa16.33■□□□□ 0.2
LDB3-208ENST00000623007 POP4O95707 220 aaKnown RBP16.33■□□□□ 0.2
LDB3-208ENST00000623007 TRBC1P01850 177 aa16.33■□□□□ 0.2
LDB3-208ENST00000623007 KITP10721 976 aa16.33■□□□□ 0.2
LDB3-208ENST00000623007 ESRRAP11474 423 aaPredicted RBP16.33■□□□□ 0.2
LDB3-208ENST00000623007 NNMTP40261 264 aa16.33■□□□□ 0.2
LDB3-208ENST00000623007 POLR2LP62875 67 aaKnown RBP16.33■□□□□ 0.2
LDB3-208ENST00000623007 ZNF77Q15935 545 aa16.33■□□□□ 0.2
LDB3-208ENST00000623007 CRY1Q16526 586 aa16.33■□□□□ 0.2
LDB3-208ENST00000623007 PRSS36Q5K4E3 855 aa16.33■□□□□ 0.2
LDB3-208ENST00000623007 CYB5D1Q6P9G0 228 aa16.33■□□□□ 0.2
LDB3-208ENST00000623007 LPGAT1Q92604 370 aa16.33■□□□□ 0.2
LDB3-208ENST00000623007 LMLNQ96KR4 655 aa16.33■□□□□ 0.2
LDB3-208ENST00000623007 NDNQ99608 321 aa16.33■□□□□ 0.2
LDB3-208ENST00000623007 BBS2Q9BXC9 721 aa16.33■□□□□ 0.2
LDB3-208ENST00000623007 KLC4Q9NSK0 619 aa16.33■□□□□ 0.2
LDB3-208ENST00000623007 IL17CQ9P0M4 197 aa16.33■□□□□ 0.2
LDB3-208ENST00000623007 MARCH4Q9P2E8 410 aaPredicted RBP16.33■□□□□ 0.2
LDB3-208ENST00000623007 PPIL1Q9Y3C6 166 aa16.33■□□□□ 0.2
LDB3-208ENST00000623007 ANKRD36A6QL64 1941 aa16.32■□□□□ 0.2
LDB3-208ENST00000623007 DLX3O60479 287 aa16.32■□□□□ 0.2
LDB3-208ENST00000623007 SRP72O76094 671 aaKnown RBP16.32■□□□□ 0.2
LDB3-208ENST00000623007 ZNF37AP17032 561 aaPredicted RBP16.32■□□□□ 0.2
LDB3-208ENST00000623007 AOC1P19801 751 aa16.32■□□□□ 0.2
LDB3-208ENST00000623007 MC4RP32245 332 aa16.32■□□□□ 0.2
LDB3-208ENST00000623007 GLRBP48167 497 aa16.32■□□□□ 0.2
LDB3-208ENST00000623007 ZRSR2Q15696 482 aaKnown RBP16.32■□□□□ 0.2
LDB3-208ENST00000623007 GPR33Q49SQ1 333 aa16.32■□□□□ 0.2
LDB3-208ENST00000623007 CES4AQ5XG92 561 aa16.32■□□□□ 0.2
LDB3-208ENST00000623007 SEL1L3Q68CR1 1132 aa16.32■□□□□ 0.2
LDB3-208ENST00000623007 ACAD11Q709F0 780 aa16.32■□□□□ 0.2
LDB3-208ENST00000623007 AHI1Q8N157 1196 aa16.32■□□□□ 0.2
LDB3-208ENST00000623007 CELF5Q8N6W0 485 aaKnown RBP16.32■□□□□ 0.2
LDB3-208ENST00000623007 WFDC5Q8TCV5 224 aa16.32■□□□□ 0.2
LDB3-208ENST00000623007 WFIKKN2Q8TEU8 576 aa16.32■□□□□ 0.2
LDB3-208ENST00000623007 PIH1D2Q8WWB5 315 aa16.32■□□□□ 0.2
LDB3-208ENST00000623007 KCNJ9Q92806 393 aa16.32■□□□□ 0.2
LDB3-208ENST00000623007 DERL2Q9GZP9 239 aa16.32■□□□□ 0.2
LDB3-208ENST00000623007 SUDS3Q9H7L9 328 aaPredicted RBP16.32■□□□□ 0.2
LDB3-208ENST00000623007 ZFYVE1Q9HBF4 777 aa16.32■□□□□ 0.2
LDB3-208ENST00000623007 MARCOQ9UEW3 520 aaPredicted RBP16.32■□□□□ 0.2
LDB3-208ENST00000623007 CRYL1Q9Y2S2 319 aa16.32■□□□□ 0.2
LDB3-208ENST00000623007 ALPK3Q96L96 1907 aa16.32■□□□□ 0.2
LDB3-208ENST00000623007 CAPN8A6NHC0 703 aa16.31■□□□□ 0.2
LDB3-208ENST00000623007 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.31■□□□□ 0.2
LDB3-208ENST00000623007 MATN2O00339 956 aa16.31■□□□□ 0.2
LDB3-208ENST00000623007 MGRN1O60291 552 aa16.31■□□□□ 0.2
LDB3-208ENST00000623007 SBK3P0C264 359 aa16.31■□□□□ 0.2
LDB3-208ENST00000623007 PABPC1P11940 636 aaKnown RBP16.31■□□□□ 0.2
LDB3-208ENST00000623007 PKMP14618 531 aaKnown RBP16.31■□□□□ 0.2
LDB3-208ENST00000623007 ITGALP20701 1170 aa16.31■□□□□ 0.2
LDB3-208ENST00000623007 TARSP26639 723 aaKnown RBP16.31■□□□□ 0.2
LDB3-208ENST00000623007 PRDX6P30041 224 aa16.31■□□□□ 0.2
LDB3-208ENST00000623007 CCR2P41597 374 aa16.31■□□□□ 0.2
LDB3-208ENST00000623007 ABL2P42684 1182 aa16.31■□□□□ 0.2
LDB3-208ENST00000623007 RECQLP46063 649 aaPredicted RBP16.31■□□□□ 0.2
LDB3-208ENST00000623007 NAGLUP54802 743 aa16.31■□□□□ 0.2
LDB3-208ENST00000623007 ZNF789Q5FWF6 425 aa16.31■□□□□ 0.2
LDB3-208ENST00000623007 GRAMD4Q6IC98 578 aa16.31■□□□□ 0.2
LDB3-208ENST00000623007 EPGNQ6UW88 154 aa16.31■□□□□ 0.2
LDB3-208ENST00000623007 USP45Q70EL2 814 aa16.31■□□□□ 0.2
LDB3-208ENST00000623007 STAG3L4Q8TBR4 150 aa16.31■□□□□ 0.2
LDB3-208ENST00000623007 CDCA3Q99618 268 aaPredicted RBP16.31■□□□□ 0.2
LDB3-208ENST00000623007 C17orf80Q9BSJ5 609 aa16.31■□□□□ 0.2
LDB3-208ENST00000623007 CCDC28BQ9BUN5 200 aa16.31■□□□□ 0.2
LDB3-208ENST00000623007 C1orf21Q9H246 121 aa16.31■□□□□ 0.2
LDB3-208ENST00000623007 TLE6Q9H808 572 aa16.31■□□□□ 0.2
LDB3-208ENST00000623007 POLR3BQ9NW08 1133 aaPredicted RBP16.31■□□□□ 0.2
LDB3-208ENST00000623007 UBA6A0AVT1 1052 aaPredicted RBP16.3■□□□□ 0.2
LDB3-208ENST00000623007 OR51F1A6NGY5 319 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 AURKAO14965 403 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 MOSPD3O75425 235 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 LYPLA1O75608 230 aaPredicted RBP16.3■□□□□ 0.2
LDB3-208ENST00000623007 RHOBTB1O94844 696 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 ASLP04424 464 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 PIRTP0C851 137 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 SRCP12931 536 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 EZRP15311 586 aaKnown RBP16.3■□□□□ 0.2
LDB3-208ENST00000623007 ZNF7P17097 686 aaPredicted RBP16.3■□□□□ 0.2
LDB3-208ENST00000623007 GJA1P17302 382 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 RPS3P23396 243 aaKnown RBP eCLIP16.3■□□□□ 0.2
LDB3-208ENST00000623007 HLA-FP30511 346 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 CD70P32970 193 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 ERVK-21P61565 698 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 ECT2LQ008S8 904 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 SATB1Q01826 763 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 MYLK3Q32MK0 819 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 CARD16Q5EG05 197 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 SH2D4BQ5SQS7 431 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 C22orf39Q6P5X5 142 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 TRIM67Q6ZTA4 783 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 KIAA0907Q7Z7F0 614 aaPredicted RBP16.3■□□□□ 0.2
LDB3-208ENST00000623007 SUGP1Q8IWZ8 645 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms