RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 SOX13Q9UN79 622 aa19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 ARL5AQ9Y689 179 aa19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 OTOGLQ3ZCN5 2332 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 ZNF292O60281 2723 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 A0A0U1RQS6 177 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 CTIFO43310 598 aaKnown RBP19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 PCDH8O95206 1070 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 SEMA4FO95754 770 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 ELFN1P0C7U0 828 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 LPOP22079 712 aaPredicted RBP19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 PSMA3P25788 255 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 PTGER3P43115 390 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 ZNF140P52738 457 aaPredicted RBP19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 VSNL1P62760 191 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 CREB5Q02930 508 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 PDIA2Q13087 525 aaKnown RBP19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 SEPT6Q14141 434 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 NAA30Q147X3 362 aaPredicted RBP19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 CCDC38Q502W7 563 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 SPDYCQ5MJ68 293 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 NLRP9Q7RTR0 991 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 MYRIPQ8NFW9 859 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 EBNA1BP2Q99848 306 aaKnown RBP19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 NAT9Q9BTE0 207 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 WRAP53Q9BUR4 548 aaKnown RBP19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 PARD6BQ9BYG5 372 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 ARRDC1-AS1Q9H2J1 176 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 IL17CQ9P0M4 197 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 RAB21Q9UL25 225 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 TEX264Q9Y6I9 313 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 TRPM6Q9BX84 2022 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 MYLKQ15746 1914 aa19.82■□□□□ 0.76
PDLIM2-221ENST00000622702 BANF1O75531 89 aa19.81■□□□□ 0.76
PDLIM2-221ENST00000622702 EPN2O95208 641 aa19.81■□□□□ 0.76
PDLIM2-221ENST00000622702 C1SP09871 688 aa19.81■□□□□ 0.76
PDLIM2-221ENST00000622702 MYBL2P10244 700 aa19.81■□□□□ 0.76
PDLIM2-221ENST00000622702 C6P13671 934 aa19.81■□□□□ 0.76
PDLIM2-221ENST00000622702 RPS21P63220 83 aaKnown RBP19.81■□□□□ 0.76
PDLIM2-221ENST00000622702 TMEM259Q4ZIN3 620 aa19.81■□□□□ 0.76
PDLIM2-221ENST00000622702 CASC4Q6P4E1 433 aa19.81■□□□□ 0.76
PDLIM2-221ENST00000622702 HORMAD1Q86X24 394 aa19.81■□□□□ 0.76
PDLIM2-221ENST00000622702 CCNJLQ8IV13 435 aa19.81■□□□□ 0.76
PDLIM2-221ENST00000622702 STYXQ8WUJ0 223 aa19.81■□□□□ 0.76
PDLIM2-221ENST00000622702 STAMBPL1Q96FJ0 436 aa19.81■□□□□ 0.76
PDLIM2-221ENST00000622702 COQ10AQ96MF6 247 aa19.81■□□□□ 0.76
PDLIM2-221ENST00000622702 WDR83Q9BRX9 315 aaKnown RBP19.81■□□□□ 0.76
PDLIM2-221ENST00000622702 CHRAC1Q9NRG0 131 aa19.81■□□□□ 0.76
PDLIM2-221ENST00000622702 SAMD15Q9P1V8 674 aa19.81■□□□□ 0.76
PDLIM2-221ENST00000622702 MAD1L1Q9Y6D9 718 aa19.81■□□□□ 0.76
PDLIM2-221ENST00000622702 RIF1Q5UIP0 2472 aaKnown RBP19.81■□□□□ 0.76
PDLIM2-221ENST00000622702 TBC1D3DA0A087WVF3 549 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 TBC1D3IA0A087WXS9 549 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 TBC1D3EA0A087X179 549 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 TBC1D3KA0A087X1G2 549 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 FAM237BA0A1B0GVD1 139 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 RGSL1A5PLK6 1076 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 TBC1D3FA6NER0 549 aaPredicted RBP19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 TBC1D3LB9A6J9 549 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 MMP20O60882 483 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 RNGTTO60942 597 aaKnown RBP19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 TBC1D3HP0C7X1 549 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 TSTD2Q5T7W7 516 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 LYSMD4Q5XG99 296 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 TBC1D3GQ6DHY5 549 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 TBC1D3CQ6IPX1 549 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 HSD11B1LQ7Z5J1 315 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 TRIM69Q86WT6 500 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 RELL1Q8IUW5 271 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 SLC41A1Q8IVJ1 513 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 TBC1D3Q8IZP1 549 aaPredicted RBP19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 HSPA12BQ96MM6 686 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 PCED1AQ9H1Q7 454 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 SAYSD1Q9NPB0 183 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 ZFR2Q9UPR6 939 aaKnown RBP19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 PKP3Q9Y446 797 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 KCTD3Q9Y597 815 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 PIEZO1Q92508 2521 aa19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 TNRC6BQ9UPQ9 1833 aaKnown RBP19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 EP300Q09472 2414 aaPredicted RBP19.8■□□□□ 0.76
PDLIM2-221ENST00000622702 A0A1W2PQU0 124 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 FAM47DPA6NHR8 397 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 STX7O15400 261 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 TM7SF2O76062 418 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 SLC4A1P02730 911 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 GM2AP17900 193 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 PGAM1P18669 254 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 ELK3P41970 407 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 SPINT3P49223 89 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 ACVR1Q04771 509 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 SPEM2Q0P670 501 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 FASTKD3Q14CZ7 662 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 AGERQ15109 404 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 SKIDA1Q1XH10 827 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 SEL1L3Q68CR1 1132 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 CYP2U1Q7Z449 544 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 TECPR1Q7Z6L1 1165 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 TMEM135Q86UB9 458 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 CCDC25Q86WR0 208 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 IGDCC3Q8IVU1 814 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 ZBED8Q8IZ13 594 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms