RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 SYNCRIPO60506 623 aaKnown RBP7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 USP12O75317 370 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 TOP3BO95985 862 aaKnown RBP7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 APOA1P02647 267 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 GJB1P08034 283 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 CD19P15391 556 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 PTPRAP18433 802 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 CYP3A5P20815 502 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 PRKCHP24723 683 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 MIPP30301 263 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 GNPDA1P46926 289 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 SERPINH1P50454 418 aaKnown RBP7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 ST13P50502 369 aaKnown RBP7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 CDH8P55286 799 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 OSTNP61366 133 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 BAMBIQ13145 260 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 TOP3AQ13472 1001 aaPredicted RBP7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 SKIV2LQ15477 1246 aaKnown RBP7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 ZNF484Q5JVG2 852 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 RBM20Q5T481 1227 aaKnown RBP7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 LETMD1Q6P1Q0 360 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 TRAF7Q6Q0C0 670 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 ZNF600Q6ZNG1 722 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 PRR23BQ6ZRT6 265 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 SAMD7Q7Z3H4 446 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 EPHX4Q8IUS5 362 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 UBQLNLQ8IYU4 475 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 NDUFAF2Q8N183 169 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 URGCPQ8TCY9 931 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 RSAD2Q8WXG1 361 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 FBXL20Q96IG2 436 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 PIWIL1Q96J94 861 aaKnown RBP7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 KCTD14Q9BQ13 255 aaPredicted RBP7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 NIFKQ9BYG3 293 aaKnown RBP7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 ZNF385DQ9H6B1 395 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 TMEM134Q9H6X4 195 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 ACAD9Q9H845 621 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 ZNF556Q9HAH1 456 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 PRDM8Q9NQV8 689 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 CHST12Q9NRB3 414 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 ABCB10Q9NRK6 738 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 IGSF5Q9NSI5 407 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 PNPOQ9NVS9 261 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 DCAF16Q9NXF7 216 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 SMPD3Q9NY59 655 aaPredicted RBP7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 B3GNT2Q9NY97 397 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 TMEM216Q9P0N5 145 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 WARS2Q9UGM6 360 aaKnown RBP7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 FBXO5Q9UKT4 447 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 PCDHB12Q9Y5F1 795 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 PCDHGA10Q9Y5H3 936 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 TEX264Q9Y6I9 313 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 HEATR9A2RTY3 570 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 LEUTXA8MZ59 168 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 PIK3R2O00459 728 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 SULT1B1O43704 296 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 CDK14O94921 469 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 GSRP00390 522 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 GOT2P00505 430 aaKnown RBP7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 IFNA16P05015 189 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 HMGN1P05114 100 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 IL7P13232 177 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 CYP2A7P20853 494 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 DNAJB2P25686 324 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 ARNTP27540 789 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 GP5P40197 560 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 RGS7P49802 495 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 OR2B6P58173 313 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 RPL10AP62906 217 aaKnown RBP7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 TAP1Q03518 808 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 ZNF33BQ06732 778 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 INCA1Q0VD86 236 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 DPYSL3Q14195 570 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 KCNJ11Q14654 390 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 PCLAFQ15004 111 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 DDR2Q16832 855 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 IGSF11Q5DX21 431 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 EEF1DP3Q658K8 133 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 STEAP3Q658P3 488 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 NOXA1Q86UR1 476 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 PLCZ1Q86YW0 608 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 TBC1D21Q8IYX1 336 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 LRRC71Q8N4P6 559 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 PPM1NQ8N819 430 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 OR13J1Q8NGT2 312 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 BCL7CQ8WUZ0 217 aaPredicted RBP7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 CIDECQ96AQ7 238 aaPredicted RBP7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 SLC45A3Q96JT2 553 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 C1orf74Q96LT6 269 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 OPALINQ96PE5 141 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 ACO2Q99798 780 aaKnown RBP7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 ZNF518BQ9C0D4 1074 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 ELOVL4Q9GZR5 314 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 MUC3BQ9H195 1237 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 ERVMER34-1Q9H9K5 563 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 MAT2BQ9NZL9 334 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 ACTR3BQ9P1U1 418 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 SIX4Q9UIU6 781 aa7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 CPSF3Q9UKF6 684 aaKnown RBP7.5□□□□□ -1.21
TRIM49B-202ENST00000622138 SARDHQ9UL12 918 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms