RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ZCCHC23Q6ZST2 131 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 CENPLQ8N0S6 344 aaPredicted RBP21.43■■□□□ 1.02
SPAST-204ENST00000621856 SCG3Q8WXD2 468 aaKnown RBP21.43■■□□□ 1.02
SPAST-204ENST00000621856 NXNL1Q96CM4 212 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 ZNF641Q96N77 438 aaPredicted RBP21.43■■□□□ 1.02
SPAST-204ENST00000621856 TCF12Q99081 682 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 FAM96AQ9H5X1 160 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 KLHL14Q9P2G3 628 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 SLC27A6Q9Y2P4 619 aa21.43■■□□□ 1.02
SPAST-204ENST00000621856 H7C0S8 307 aa21.42■■□□□ 1.02
SPAST-204ENST00000621856 KLHL2O95198 593 aa21.42■■□□□ 1.02
SPAST-204ENST00000621856 SRPRAP08240 638 aaKnown RBP21.42■■□□□ 1.02
SPAST-204ENST00000621856 GLRBP48167 497 aa21.42■■□□□ 1.02
SPAST-204ENST00000621856 KPNA2P52292 529 aaKnown RBP21.42■■□□□ 1.02
SPAST-204ENST00000621856 CDKN2DP55273 166 aa21.42■■□□□ 1.02
SPAST-204ENST00000621856 PEX6Q13608 980 aa21.42■■□□□ 1.02
SPAST-204ENST00000621856 ATAT1Q5SQI0 421 aa21.42■■□□□ 1.02
SPAST-204ENST00000621856 RNF187Q5TA31 235 aaPredicted RBP21.42■■□□□ 1.02
SPAST-204ENST00000621856 GRAMD4Q6IC98 578 aa21.42■■□□□ 1.02
SPAST-204ENST00000621856 LRRC8EQ6NSJ5 796 aa21.42■■□□□ 1.02
SPAST-204ENST00000621856 CES5AQ6NT32 575 aa21.42■■□□□ 1.02
SPAST-204ENST00000621856 GDPD4Q6W3E5 623 aa21.42■■□□□ 1.02
SPAST-204ENST00000621856 USP45Q70EL2 814 aa21.42■■□□□ 1.02
SPAST-204ENST00000621856 PLPP6Q8IY26 295 aa21.42■■□□□ 1.02
SPAST-204ENST00000621856 OR2A12Q8NGT7 310 aa21.42■■□□□ 1.02
SPAST-204ENST00000621856 GRIN3AQ8TCU5 1115 aa21.42■■□□□ 1.02
SPAST-204ENST00000621856 SREK1Q8WXA9 508 aaKnown RBP21.42■■□□□ 1.02
SPAST-204ENST00000621856 ECHDC3Q96DC8 303 aa21.42■■□□□ 1.02
SPAST-204ENST00000621856 FAM83CQ9BQN1 747 aa21.42■■□□□ 1.02
SPAST-204ENST00000621856 PLCD4Q9BRC7 762 aa21.42■■□□□ 1.02
SPAST-204ENST00000621856 ECT2Q9H8V3 914 aa21.42■■□□□ 1.02
SPAST-204ENST00000621856 GPAMQ9HCL2 828 aa21.42■■□□□ 1.02
SPAST-204ENST00000621856 NPHS2Q9NP85 383 aa21.42■■□□□ 1.02
SPAST-204ENST00000621856 SLC30A1Q9Y6M5 507 aa21.42■■□□□ 1.02
SPAST-204ENST00000621856 WASH3PC4AMC7 463 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 IL1BP01584 269 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 DLDP09622 509 aaKnown RBP21.41■■□□□ 1.02
SPAST-204ENST00000621856 FGF3P11487 239 aaPredicted RBP21.41■■□□□ 1.02
SPAST-204ENST00000621856 BMP8BP34820 402 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 SLC6A11P48066 632 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 CDKN1CP49918 316 aaPredicted RBP21.41■■□□□ 1.02
SPAST-204ENST00000621856 ST8SIA6P61647 398 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 AARS2Q5JTZ9 985 aaKnown RBP21.41■■□□□ 1.02
SPAST-204ENST00000621856 PSAPL1Q6NUJ1 521 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 ZNF549Q6P9A3 640 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 VITQ6UXI7 678 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 TAS2R42Q7RTR8 314 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 ETFBKMTQ8IXQ9 262 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 YAF2Q8IY57 180 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 RDH11Q8TC12 318 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 FRS2Q8WU20 508 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 VOPP1Q96AW1 172 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 EID2BQ96D98 161 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 HEPHQ9BQS7 1158 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 CCDC68Q9H2F9 335 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.41■■□□□ 1.02
SPAST-204ENST00000621856 CPSF2Q9P2I0 782 aaKnown RBP21.41■■□□□ 1.02
SPAST-204ENST00000621856 DEC1Q9P2X7 70 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 VPS9D1Q9Y2B5 631 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 KIF26AQ9ULI4 1882 aaPredicted RBP21.41■■□□□ 1.02
SPAST-204ENST00000621856 A0A1W2PQ67 120 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 A8MX80 341 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 CLDN7O95471 211 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 MYL2P10916 166 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 TTPAP49638 278 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 DLG1Q12959 904 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 ADAM15Q13444 863 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 CSHL1Q14406 222 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 CCDC91Q7Z6B0 441 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 SPATA6LQ8N4H0 392 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.41■■□□□ 1.02
SPAST-204ENST00000621856 KLHL32Q96NJ5 620 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 AARSD1Q9BTE6 412 aaKnown RBP21.41■■□□□ 1.02
SPAST-204ENST00000621856 TRIM55Q9BYV6 548 aa21.41■■□□□ 1.02
SPAST-204ENST00000621856 NPIPB15A6NHN6 443 aaPredicted RBP21.4■■□□□ 1.02
SPAST-204ENST00000621856 SERPINE1P05121 402 aa21.4■■□□□ 1.02
SPAST-204ENST00000621856 RALBP11234 206 aa21.4■■□□□ 1.02
SPAST-204ENST00000621856 FDXRP22570 491 aa21.4■■□□□ 1.02
SPAST-204ENST00000621856 XIAPP98170 497 aa21.4■■□□□ 1.02
SPAST-204ENST00000621856 KDSRQ06136 332 aa21.4■■□□□ 1.02
SPAST-204ENST00000621856 CACNG1Q06432 222 aa21.4■■□□□ 1.02
SPAST-204ENST00000621856 FAM83EQ2M2I3 478 aa21.4■■□□□ 1.02
SPAST-204ENST00000621856 CES4AQ5XG92 561 aa21.4■■□□□ 1.02
SPAST-204ENST00000621856 EP400NLQ6ZTU2 488 aa21.4■■□□□ 1.02
SPAST-204ENST00000621856 CCDC121Q6ZUS5 278 aa21.4■■□□□ 1.02
SPAST-204ENST00000621856 PIANPQ8IYJ0 282 aa21.4■■□□□ 1.02
SPAST-204ENST00000621856 FSTL5Q8N475 847 aaPredicted RBP21.4■■□□□ 1.02
SPAST-204ENST00000621856 CPA6Q8N4T0 437 aa21.4■■□□□ 1.02
SPAST-204ENST00000621856 HEXDCQ8WVB3 486 aa21.4■■□□□ 1.02
SPAST-204ENST00000621856 LPGAT1Q92604 370 aa21.4■■□□□ 1.02
SPAST-204ENST00000621856 C7orf26Q96N11 449 aa21.4■■□□□ 1.02
SPAST-204ENST00000621856 MYADMQ96S97 322 aa21.4■■□□□ 1.02
SPAST-204ENST00000621856 UNKQ9C0B0 810 aaKnown RBP21.4■■□□□ 1.02
SPAST-204ENST00000621856 HPS4Q9NQG7 708 aa21.4■■□□□ 1.02
SPAST-204ENST00000621856 ELOVL2Q9NXB9 296 aa21.4■■□□□ 1.02
SPAST-204ENST00000621856 BPTFQ12830 3046 aa21.4■■□□□ 1.02
SPAST-204ENST00000621856 SCN8AQ9UQD0 1980 aa21.4■■□□□ 1.02
SPAST-204ENST00000621856 OTOL1A6NHN0 477 aaPredicted RBP21.39■■□□□ 1.01
SPAST-204ENST00000621856 G3V2L1 256 aa21.39■■□□□ 1.01
SPAST-204ENST00000621856 TK2O00142 265 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms