RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 PCDH12Q9NPG4 1184 aa18.59■□□□□ 0.57
SEMA6C-210ENST00000621728 TXNDC16Q9P2K2 825 aa18.59■□□□□ 0.57
SEMA6C-210ENST00000621728 FBXO5Q9UKT4 447 aa18.59■□□□□ 0.57
SEMA6C-210ENST00000621728 RIMKLBQ9ULI2 386 aa18.59■□□□□ 0.57
SEMA6C-210ENST00000621728 PPM1HQ9ULR3 514 aa18.59■□□□□ 0.57
SEMA6C-210ENST00000621728 ITM2BQ9Y287 266 aa18.59■□□□□ 0.57
SEMA6C-210ENST00000621728 MTO1Q9Y2Z2 717 aaKnown RBP18.59■□□□□ 0.57
SEMA6C-210ENST00000621728 CKAP5Q14008 2032 aa18.59■□□□□ 0.57
SEMA6C-210ENST00000621728 TSPAN11A1L157 253 aa18.59■□□□□ 0.57
SEMA6C-210ENST00000621728 IL1BP01584 269 aa18.59■□□□□ 0.57
SEMA6C-210ENST00000621728 ITGA2BP08514 1039 aa18.59■□□□□ 0.57
SEMA6C-210ENST00000621728 GMPRP36959 345 aa18.59■□□□□ 0.57
SEMA6C-210ENST00000621728 ENPP2Q13822 863 aa18.59■□□□□ 0.57
SEMA6C-210ENST00000621728 ELAVL3Q14576 367 aaKnown RBP18.59■□□□□ 0.57
SEMA6C-210ENST00000621728 TMEM196Q5HYL7 178 aa18.59■□□□□ 0.57
SEMA6C-210ENST00000621728 BRAT1Q6PJG6 821 aa18.59■□□□□ 0.57
SEMA6C-210ENST00000621728 TPRG1Q6ZUI0 275 aa18.59■□□□□ 0.57
SEMA6C-210ENST00000621728 C2CD4AQ8NCU7 369 aaPredicted RBP18.59■□□□□ 0.57
SEMA6C-210ENST00000621728 PEX13Q92968 403 aa18.59■□□□□ 0.57
SEMA6C-210ENST00000621728 FAM167BQ9BTA0 163 aa18.59■□□□□ 0.57
SEMA6C-210ENST00000621728 UPK3BL1B0FP48 263 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 LOC730098B7Z3J9 87 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 UPK3BL2E5RIL1 263 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 KRT37O76014 449 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 KIAA0754O94854 1291 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 HAUS5O94927 633 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 MT-ND3P03897 115 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 PRNPP04156 253 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 BRAFP15056 766 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 PSMA3P25788 255 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 MC4RP32245 332 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 HMGCLP35914 325 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 PSMD8P48556 350 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 PEX6Q13608 980 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 MPP2Q14168 576 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 GRTP1Q5TC63 336 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 KIAA1211LQ6NV74 962 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 TTC7BQ86TV6 843 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 OR4L1Q8NH43 312 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 SPOCK2Q92563 424 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 LYSMD1Q96S90 227 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 C8orf33Q9H7E9 229 aaPredicted RBP18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 CAB39LQ9H9S4 337 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 PKP3Q9Y446 797 aa18.58■□□□□ 0.56
SEMA6C-210ENST00000621728 ZNF106Q9H2Y7 1883 aaKnown RBP18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 CD3EAPO15446 510 aaKnown RBP18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 RFPL1O75677 317 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 KRT38O76015 456 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 C1SP09871 688 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 KRT4P19013 534 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 CA5AP35218 305 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 SERPINB9P50453 376 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 PTSQ03393 145 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 TDGQ13569 410 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 CNSTQ6PJW8 725 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 ZC3HC1Q86WB0 502 aaKnown RBP18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 CILP2Q8IUL8 1156 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 SUGP1Q8IWZ8 645 aaKnown RBP18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 DCLK2Q8N568 766 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 LRIG1Q96JA1 1093 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 CCDC134Q9H6E4 229 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 CATSPERZQ9NTU4 200 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 SUN2Q9UH99 717 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 GAPDHSO14556 408 aaPredicted RBP18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 SPINT1O43278 529 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 PYGBP11216 843 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 SRFP11831 508 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 BPIP17213 487 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 LIMK2P53671 638 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 POLR2LP62875 67 aaKnown RBP18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 XIAPP98170 497 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 PSAPL1Q6NUJ1 521 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 FAM151BQ6UXP7 276 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 PIANPQ8IYJ0 282 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 IL17RCQ8NAC3 791 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 TMIEQ8NEW7 156 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 MAFAQ8NHW3 353 aaPredicted RBP18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 VPS39Q96JC1 886 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 C12orf65Q9H3J6 166 aaKnown RBP18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 KCNK9Q9NPC2 374 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 DKK3Q9UBP4 350 aa18.57■□□□□ 0.56
SEMA6C-210ENST00000621728 ADAM23O75077 832 aa18.56■□□□□ 0.56
SEMA6C-210ENST00000621728 KLF8O95600 359 aaPredicted RBP18.56■□□□□ 0.56
SEMA6C-210ENST00000621728 ALDOAP04075 364 aaKnown RBP18.56■□□□□ 0.56
SEMA6C-210ENST00000621728 FOXN2P32314 431 aa18.56■□□□□ 0.56
SEMA6C-210ENST00000621728 CSE1LP55060 971 aaKnown RBP18.56■□□□□ 0.56
SEMA6C-210ENST00000621728 PDE1BQ01064 536 aa18.56■□□□□ 0.56
SEMA6C-210ENST00000621728 SLC44A4Q53GD3 710 aa18.56■□□□□ 0.56
SEMA6C-210ENST00000621728 AFTPHQ6ULP2 937 aa18.56■□□□□ 0.56
SEMA6C-210ENST00000621728 SH2D5Q6ZV89 423 aa18.56■□□□□ 0.56
SEMA6C-210ENST00000621728 CMC1Q7Z7K0 106 aa18.56■□□□□ 0.56
SEMA6C-210ENST00000621728 NDUFAF2Q8N183 169 aa18.56■□□□□ 0.56
SEMA6C-210ENST00000621728 SLC6A17Q9H1V8 727 aa18.56■□□□□ 0.56
SEMA6C-210ENST00000621728 A0A1W2PQ67 120 aa18.55■□□□□ 0.56
SEMA6C-210ENST00000621728 TPP1O14773 563 aa18.55■□□□□ 0.56
SEMA6C-210ENST00000621728 S1PR4O95977 384 aa18.55■□□□□ 0.56
SEMA6C-210ENST00000621728 TOP3BO95985 862 aaKnown RBP18.55■□□□□ 0.56
SEMA6C-210ENST00000621728 COL9A1P20849 921 aa18.55■□□□□ 0.56
SEMA6C-210ENST00000621728 SAT1P21673 171 aa18.55■□□□□ 0.56
SEMA6C-210ENST00000621728 XPAP23025 273 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms