RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 TPP2P29144 1249 aaPredicted RBP11.37□□□□□ -0.59
CLIP1-219ENST00000620786 CDC42P60953 191 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 GNA12Q03113 381 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 HID1Q8IV36 788 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 C1orf127Q8N9H9 656 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 BHLHE22Q8NFJ8 381 aaPredicted RBP11.37□□□□□ -0.59
CLIP1-219ENST00000620786 HMCESQ96FZ2 354 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 TEKT5Q96M29 485 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 SEMA3GQ9NS98 782 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 VWA7Q9Y334 891 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 BTNL10A8MVZ5 291 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 ITGA2P17301 1181 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 DHPSP49366 369 aaPredicted RBP11.37□□□□□ -0.59
CLIP1-219ENST00000620786 DGKEP52429 567 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 RABGGTBP53611 331 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 SPDYCQ5MJ68 293 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 DEF8Q6ZN54 512 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 CFAP206Q8IYR0 622 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 RAD51AP1Q96B01 352 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 EQTNQ9NQ60 294 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 RBPJLQ9UBG7 517 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 SRRDQ9UH36 339 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 OR2AG2A6NM03 316 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 PDE9AO76083 593 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 MATN4O95460 622 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 SNRPB2P08579 225 aaKnown RBP11.37□□□□□ -0.59
CLIP1-219ENST00000620786 FAM58BPP0C7Q3 252 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 MYBPC1Q00872 1141 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 BNC1Q01954 994 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 DSC2Q02487 901 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 ZNF155Q12901 538 aaPredicted RBP11.37□□□□□ -0.59
CLIP1-219ENST00000620786 KRR1Q13601 381 aaKnown RBP11.37□□□□□ -0.59
CLIP1-219ENST00000620786 GPR180Q86V85 440 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 CREG2Q8IUH2 290 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 PRCCQ92733 491 aaPredicted RBP11.37□□□□□ -0.59
CLIP1-219ENST00000620786 ZNF607Q96SK3 696 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 ELL3Q9HB65 397 aaPredicted RBP11.37□□□□□ -0.59
CLIP1-219ENST00000620786 NMUR1Q9HB89 426 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 ARHGEF3Q9NR81 526 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 XPR1Q9UBH6 696 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 CIDEBQ9UHD4 219 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 STXBP5LQ9Y2K9 1186 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 INSL6Q9Y581 213 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 ACTL7BQ9Y614 415 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 CST3P01034 146 aaPredicted RBP11.37□□□□□ -0.59
CLIP1-219ENST00000620786 PRG2P13727 222 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 C4BPBP20851 252 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 LIPMQ5VYY2 423 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 TRIQKQ629K1 86 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 SMYD1Q8NB12 490 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 OR7D4Q8NG98 312 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 ZNF671Q8TAW3 534 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 SLC38A2Q96QD8 506 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 SIRPGQ9P1W8 387 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 L1RE1Q9UN81 338 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 PSMD13Q9UNM6 376 aa11.37□□□□□ -0.59
CLIP1-219ENST00000620786 UBR1Q8IWV7 1749 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 TIE1P35590 1138 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 RANBP1P43487 201 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 MASP1P48740 699 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 TRIM16LQ309B1 348 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 CCNYL2Q5T2Q4 361 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 GDF6Q6KF10 455 aaPredicted RBP11.36□□□□□ -0.59
CLIP1-219ENST00000620786 POMZP3Q6PJE2 187 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 IZUMO1Q8IYV9 350 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 DNAJB14Q8TBM8 379 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 OLFM1Q99784 485 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 FAM83DQ9H4H8 585 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 LRRC19Q9H756 370 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 CAB39LQ9H9S4 337 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 ABI3Q9P2A4 366 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 ZNF214Q9UL59 606 aaPredicted RBP11.36□□□□□ -0.59
CLIP1-219ENST00000620786 ZNF536O15090 1300 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 RICTORQ6R327 1708 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 CENPXA8MT69 81 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 AZIN1O14977 448 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 MGRN1O60291 552 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 SERPINB7O75635 380 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 PROCP04070 461 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 FGFR3P22607 806 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 HTR7P34969 479 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 SMIM11AP58511 58 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 TAS2R41P59536 307 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 ATP13A5Q4VNC0 1218 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 TEX44Q53QW1 395 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 ZNF57Q68EA5 555 aaPredicted RBP11.36□□□□□ -0.59
CLIP1-219ENST00000620786 TRIM40Q6P9F5 258 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 OFCC1Q8IZS5 231 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 HMGB4Q8WW32 186 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 KLK6Q92876 244 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 JSRP1Q96MG2 331 aaPredicted RBP11.36□□□□□ -0.59
CLIP1-219ENST00000620786 ABCB8Q9NUT2 735 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 TOP3BO95985 862 aaKnown RBP11.36□□□□□ -0.59
CLIP1-219ENST00000620786 GDI1P31150 447 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 ZNF132P52740 706 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 LILRA4P59901 499 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 SPIBQ01892 262 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 C9orf64Q5T6V5 341 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 BTN2A1Q7KYR7 527 aa11.36□□□□□ -0.59
CLIP1-219ENST00000620786 TAC4Q86UU9 113 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms