RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 C2orf40Q9H1Z8 148 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 TM9SF3Q9HD45 589 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 RBAKQ9NYW8 714 aaPredicted RBP10.38□□□□□ -0.75
VPS11-207ENST00000620429 IL37Q9NZH6 218 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 GABBR1Q9UBS5 961 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 WARS2Q9UGM6 360 aaKnown RBP10.38□□□□□ -0.75
VPS11-207ENST00000620429 EMCNQ9ULC0 261 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 CNTN6Q9UQ52 1028 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 E7ENX8 843 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 M0R3G1 203 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 PDHXO00330 501 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 TRIM24O15164 1050 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 SEC24AO95486 1093 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 HAAOP46952 286 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 POLD2P49005 469 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 ACTR2P61160 394 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 POLR2GP62487 172 aaKnown RBP eCLIP10.37□□□□□ -0.75
VPS11-207ENST00000620429 KIZQ2M2Z5 673 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 DCAF15Q66K64 600 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 GPAT2Q6NUI2 795 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 DARS2Q6PI48 645 aaKnown RBP10.37□□□□□ -0.75
VPS11-207ENST00000620429 UTS2BQ765I0 119 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 PRSS48Q7RTY5 328 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 ADCK1Q86TW2 530 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 KCTD6Q8NC69 237 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 APPL2Q8NEU8 664 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 OR5B17Q8NGF7 314 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 SPATA18Q8TC71 538 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 BCL7CQ8WUZ0 217 aaPredicted RBP10.37□□□□□ -0.75
VPS11-207ENST00000620429 SNAPC3Q92966 411 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 FAF2Q96CS3 445 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 CCDC120Q96HB5 630 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 ZBTB45Q96K62 511 aaPredicted RBP10.37□□□□□ -0.75
VPS11-207ENST00000620429 A0A0B4J203 849 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 TYW5A2RUC4 315 aaKnown RBP10.37□□□□□ -0.75
VPS11-207ENST00000620429 TOR1AO14656 332 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 LRCH4O75427 683 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 CYP2A7P20853 494 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 DNAJB2P25686 324 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 KRT20P35900 424 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 SERPINH1P50454 418 aaKnown RBP10.37□□□□□ -0.75
VPS11-207ENST00000620429 OR2B6P58173 313 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 ADARB1P78563 741 aaKnown RBP10.37□□□□□ -0.75
VPS11-207ENST00000620429 BNC1Q01954 994 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 SLC25A11Q02978 314 aaKnown RBP10.37□□□□□ -0.75
VPS11-207ENST00000620429 INCA1Q0VD86 236 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 POLD3Q15054 466 aaPredicted RBP10.37□□□□□ -0.75
VPS11-207ENST00000620429 SKIV2LQ15477 1246 aaKnown RBP10.37□□□□□ -0.75
VPS11-207ENST00000620429 ZBTB41Q5SVQ8 909 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 SWSAP1Q6NVH7 229 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 FIP1L1Q6UN15 594 aaKnown RBP10.37□□□□□ -0.75
VPS11-207ENST00000620429 ZNF767PQ75MW2 155 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 NOXA1Q86UR1 476 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 THNSL1Q8IYQ7 743 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 NIPA2Q8N8Q9 360 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 OR13J1Q8NGT2 312 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 DYNC2LI1Q8TCX1 351 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 OR52B2Q96RD2 323 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 KCTD14Q9BQ13 255 aaPredicted RBP10.37□□□□□ -0.75
VPS11-207ENST00000620429 TEX13BQ9BXU2 312 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 PCDHAC1Q9H158 963 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 ERVMER34-1Q9H9K5 563 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 PAK1IP1Q9NWT1 392 aaPredicted RBP10.37□□□□□ -0.75
VPS11-207ENST00000620429 SNX7Q9UNH6 387 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 PCDHB12Q9Y5F1 795 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 SSC5DA1L4H1 1573 aa10.37□□□□□ -0.75
VPS11-207ENST00000620429 H0YAE9 185 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 APOC4-APOC2K7ER74 178 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 PLIN3O60664 434 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 ZNF780AO75290 641 aaPredicted RBP10.36□□□□□ -0.75
VPS11-207ENST00000620429 LSM8O95777 96 aaKnown RBP10.36□□□□□ -0.75
VPS11-207ENST00000620429 APOC2P02655 101 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 CD9P21926 228 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 SFNP31947 248 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 ROR1Q01973 937 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 RBM48Q5RL73 367 aaKnown RBP10.36□□□□□ -0.75
VPS11-207ENST00000620429 NPNTQ6UXI9 565 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 GDPD3Q7L5L3 318 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 ARFGAP1Q8N6T3 406 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 JOSD2Q8TAC2 188 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 PROX1Q92786 737 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 DACT3Q96B18 629 aaPredicted RBP10.36□□□□□ -0.75
VPS11-207ENST00000620429 SECISBP2Q96T21 854 aaKnown RBP10.36□□□□□ -0.75
VPS11-207ENST00000620429 UNC93B1Q9H1C4 597 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 RAB6BQ9NRW1 208 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 AGPAT4Q9NRZ5 378 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 CCM2LQ9NUG4 571 aaPredicted RBP10.36□□□□□ -0.75
VPS11-207ENST00000620429 SMPD3Q9NY59 655 aaPredicted RBP10.36□□□□□ -0.75
VPS11-207ENST00000620429 TAS2R7Q9NYW3 318 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 ZC3H7BQ9UGR2 993 aaKnown RBP10.36□□□□□ -0.75
VPS11-207ENST00000620429 CPSF3Q9UKF6 684 aaKnown RBP10.36□□□□□ -0.75
VPS11-207ENST00000620429 TMCC3Q9ULS5 477 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 MAFFQ9ULX9 164 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 DIMT1Q9UNQ2 313 aaKnown RBP10.36□□□□□ -0.75
VPS11-207ENST00000620429 GRIP1Q9Y3R0 1128 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 PCDHGA7Q9Y5G6 932 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 PCDHGA10Q9Y5H3 936 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 RNF103-CHMP3A0A140T963 221 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 HMX2A2RU54 273 aa10.36□□□□□ -0.75
VPS11-207ENST00000620429 TRPC5OSA6NMA1 111 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms