RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 GALNT15Q8N3T1 639 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 PDCD7Q8N8D1 485 aaKnown RBP15.99■□□□□ 0.15
BRCA1-228ENST00000618469 LMX1AQ8TE12 382 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 PDXPQ96GD0 296 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 QKIQ96PU8 341 aaKnown RBP eCLIP15.99■□□□□ 0.15
BRCA1-228ENST00000618469 RBM15Q96T37 977 aaKnown RBP eCLIP15.99■□□□□ 0.15
BRCA1-228ENST00000618469 HERPUD2Q9BSE4 406 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 LRRC61Q9BV99 259 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 WDR26Q9H7D7 661 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 GOLGA6AQ9NYA3 693 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 NLGN3Q9NZ94 848 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 KLQ9UEF7 1012 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 PPIL1Q9Y3C6 166 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 CAPN6Q9Y6Q1 641 aa15.99■□□□□ 0.15
BRCA1-228ENST00000618469 NEMP2A6NFY4 417 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 APOC4-APOC2K7ER74 178 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 K7ESM1 405 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 CACNB4O00305 520 aaPredicted RBP15.98■□□□□ 0.15
BRCA1-228ENST00000618469 TLX3O43711 291 aaPredicted RBP15.98■□□□□ 0.15
BRCA1-228ENST00000618469 RFPL3O75679 317 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 FTCDO95954 541 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 PRLP01236 227 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 APOC2P02655 101 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 KIAA1024LP59773 190 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 COPS2P61201 443 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 RPL26P61254 145 aaKnown RBP15.98■□□□□ 0.15
BRCA1-228ENST00000618469 DAB2P98082 770 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 PPARDQ03181 441 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 ZNF211Q13398 564 aaPredicted RBP15.98■□□□□ 0.15
BRCA1-228ENST00000618469 TCEA2Q15560 299 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 PCSK7Q16549 785 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 ALG11Q2TAA5 492 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 PROX2Q3B8N5 592 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 FAXCQ5TGI0 409 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 CRTC1Q6UUV9 634 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 ENPP7Q6UWV6 458 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 HID1Q8IV36 788 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 PELI3Q8N2H9 469 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 ATL2Q8NHH9 583 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 BTN2A2Q8WVV5 523 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 ALG3Q92685 438 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 FUBP1Q96AE4 644 aaKnown RBP15.98■□□□□ 0.15
BRCA1-228ENST00000618469 IMP4Q96G21 291 aaKnown RBP15.98■□□□□ 0.15
BRCA1-228ENST00000618469 WDR92Q96MX6 357 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 OSBPL8Q9BZF1 889 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 SLC13A1Q9BZW2 595 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 SLC25A51Q9H1U9 297 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 SPASTQ9UBP0 616 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 AMFRQ9UKV5 643 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 DNPEPQ9ULA0 475 aa15.98■□□□□ 0.15
BRCA1-228ENST00000618469 PACSIN2Q9UNF0 486 aaPredicted RBP15.98■□□□□ 0.15
BRCA1-228ENST00000618469 RPL26L1Q9UNX3 145 aaKnown RBP15.98■□□□□ 0.15
BRCA1-228ENST00000618469 ARID1BQ8NFD5 2236 aaPredicted RBP15.97■□□□□ 0.15
BRCA1-228ENST00000618469 PYCARD-AS1I3L0S3 204 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 SCAMP1O15126 338 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 RASGRP1O95267 797 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 C1SP09871 688 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 GIMD1P0DJR0 217 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 ZNF30P17039 623 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 CKMT2P17540 419 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 PTPN7P35236 360 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 C1orf61Q13536 156 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 NOMO1Q15155 1222 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 DEFB133Q30KQ1 61 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 TEX44Q53QW1 395 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 RAET1GQ6H3X3 334 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 AADACL2Q6P093 401 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 PNCKQ6P2M8 343 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 NYAP1Q6ZVC0 841 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 Q6ZVL8 140 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 RD3Q7Z3Z2 195 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 ZNF605Q86T29 641 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 HEATR4Q86WZ0 1026 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 UBL4BQ8N7F7 174 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 CCDC112Q8NEF3 446 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 TSACCQ96A04 125 aaPredicted RBP15.97■□□□□ 0.15
BRCA1-228ENST00000618469 DUSP23Q9BVJ7 150 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 ADGRE3Q9BY15 652 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 GLOD4Q9HC38 313 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 KCTD5Q9NXV2 234 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 KLHL8Q9P2G9 620 aaPredicted RBP15.97■□□□□ 0.15
BRCA1-228ENST00000618469 CD84Q9UIB8 345 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 PCDHGA1Q9Y5H4 931 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 ADGRG1Q9Y653 693 aa15.97■□□□□ 0.15
BRCA1-228ENST00000618469 C1orf232A0A0U1RR37 186 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 HACD1B0YJ81 288 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 F5H423 210 aaPredicted RBP15.96■□□□□ 0.15
BRCA1-228ENST00000618469 H7C0C1 242 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 ATXN7O15265 892 aaPredicted RBP15.96■□□□□ 0.15
BRCA1-228ENST00000618469 ARHGAP6O43182 974 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 MTSS1O43312 755 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 MT-CYBP00156 380 aaPredicted RBP15.96■□□□□ 0.15
BRCA1-228ENST00000618469 SLC4A1P02730 911 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 CELA2BP08218 269 aaPredicted RBP15.96■□□□□ 0.15
BRCA1-228ENST00000618469 TSHRP16473 764 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 NFKB1P19838 968 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 KELP23276 732 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 CETN2P41208 172 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 ATP5OP48047 213 aa15.96■□□□□ 0.15
BRCA1-228ENST00000618469 BLKP51451 505 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms