RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 SWSAP1Q6NVH7 229 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 DPY19L3Q6ZPD9 716 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 GALNT7Q86SF2 657 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 DNAJC10Q8IXB1 793 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 CLIP4Q8N3C7 705 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 ZNF570Q96NI8 536 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 TVP23AA6NH52 213 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 HSBP1L1C9JCN9 74 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 PROSCO94903 275 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 IDNKQ5T6J7 187 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 NT5DC3Q86UY8 548 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 OR7G2Q8NG99 324 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 SETD6Q8TBK2 473 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 EXOC2Q96KP1 924 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 IGSF9BQ9UPX0 1349 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 OR1I1O60431 355 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 DGAT1O75907 488 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 EPHA3P29320 983 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 FNTBP49356 437 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 PIWIL4Q7Z3Z4 852 aaKnown RBP15.02■□□□□ -0
COL5A1-208ENST00000618395 RASGEF1AQ8N9B8 481 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 VAT1Q99536 393 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 PDP1Q9P0J1 537 aaPredicted RBP15.02■□□□□ -0
COL5A1-208ENST00000618395 MFHAS1Q9Y4C4 1052 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 CLUHO75153 1309 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 DPYSL4O14531 572 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 UGT2B17O75795 530 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 LSM8O95777 96 aaKnown RBP15.02■□□□□ -0
COL5A1-208ENST00000618395 HARS2P49590 506 aaKnown RBP15.02■□□□□ -0
COL5A1-208ENST00000618395 RAB5CP51148 216 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 CHRDL2Q6WN34 429 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 ZNF782Q6ZMW2 699 aaPredicted RBP15.02■□□□□ -0
COL5A1-208ENST00000618395 COMMD3Q9UBI1 195 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 NCOA3Q9Y6Q9 1424 aa15.02□□□□□ -0.01
COL5A1-208ENST00000618395 CHADO15335 359 aa15.02□□□□□ -0.01
COL5A1-208ENST00000618395 TNNI3P19429 210 aa15.02□□□□□ -0.01
COL5A1-208ENST00000618395 C16orf46Q6P387 395 aa15.02□□□□□ -0.01
COL5A1-208ENST00000618395 USP30Q70CQ3 517 aa15.02□□□□□ -0.01
COL5A1-208ENST00000618395 ARHGAP20Q9P2F6 1191 aa15.02□□□□□ -0.01
COL5A1-208ENST00000618395 LSM7Q9UK45 103 aaKnown RBP15.02□□□□□ -0.01
COL5A1-208ENST00000618395 SPHKAPQ2M3C7 1700 aa15.02□□□□□ -0.01
COL5A1-208ENST00000618395 STK25O00506 426 aa15.02□□□□□ -0.01
COL5A1-208ENST00000618395 RPL4P36578 427 aaKnown RBP15.02□□□□□ -0.01
COL5A1-208ENST00000618395 GXYLT1Q4G148 440 aa15.02□□□□□ -0.01
COL5A1-208ENST00000618395 GPR65Q8IYL9 337 aa15.02□□□□□ -0.01
COL5A1-208ENST00000618395 ESX1Q8N693 406 aa15.02□□□□□ -0.01
COL5A1-208ENST00000618395 SNX6Q9UNH7 406 aa15.02□□□□□ -0.01
COL5A1-208ENST00000618395 CROCC2H7BZ55 1655 aa15.02□□□□□ -0.01
COL5A1-208ENST00000618395 J3QRK9 145 aa15.02□□□□□ -0.01
COL5A1-208ENST00000618395 MAFKO60675 156 aa15.02□□□□□ -0.01
COL5A1-208ENST00000618395 MGAT1P26572 445 aa15.02□□□□□ -0.01
COL5A1-208ENST00000618395 ARCN1P48444 511 aaKnown RBP15.02□□□□□ -0.01
COL5A1-208ENST00000618395 GIT2Q14161 759 aa15.02□□□□□ -0.01
COL5A1-208ENST00000618395 PITRM1Q5JRX3 1037 aa15.02□□□□□ -0.01
COL5A1-208ENST00000618395 GPR158Q5T848 1215 aa15.02□□□□□ -0.01
COL5A1-208ENST00000618395 FBXL8Q96CD0 374 aa15.02□□□□□ -0.01
COL5A1-208ENST00000618395 C7orf50Q9BRJ6 194 aaKnown RBP15.02□□□□□ -0.01
COL5A1-208ENST00000618395 PAQR5Q9NXK6 330 aaPredicted RBP15.02□□□□□ -0.01
COL5A1-208ENST00000618395 SERPINB7O75635 380 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 MBTD1Q05BQ5 628 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 CYP20A1Q6UW02 462 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 ZNF571Q7Z3V5 609 aaPredicted RBP15.01□□□□□ -0.01
COL5A1-208ENST00000618395 SLC47A2Q86VL8 602 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 XPNPEP3Q9NQH7 507 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 ADAM28Q9UKQ2 775 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 TAF6LQ9Y6J9 622 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 IFNA2P01563 188 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 METTL21CQ5VZV1 264 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 ZNF470Q6ECI4 717 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 ADGRF4Q8IZF3 695 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 IPCEF1Q8WWN9 437 aaPredicted RBP15.01□□□□□ -0.01
COL5A1-208ENST00000618395 TNFRSF25Q93038 417 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 FKBP7Q9Y680 259 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 LMTK3Q96Q04 1460 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 CDC42BPBQ9Y5S2 1711 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 TP73O15350 636 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 TRIM48Q8IWZ4 208 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 SGPL1O95470 568 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 NUDT14O95848 222 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 ACTR3P61158 418 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 ATG9AQ7Z3C6 839 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 NEK7Q8TDX7 302 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 PPP3R2Q96LZ3 170 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 ZNF35P13682 527 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 TLR1Q15399 786 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 TMEM179Q6ZVK1 233 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 ZNF283Q8N7M2 679 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 SLC22A8Q8TCC7 542 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 KCTD7Q96MP8 289 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 TMEM47Q9BQJ4 181 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 VAMP1P23763 118 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 PAPD4Q6PIY7 484 aaKnown RBP15.01□□□□□ -0.01
COL5A1-208ENST00000618395 IL22Q9GZX6 179 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 HCN3Q9P1Z3 774 aa15.01□□□□□ -0.01
COL5A1-208ENST00000618395 PER2O15055 1255 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 TGM6O95932 706 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 ERVK-8P63133 956 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 VPS26BQ4G0F5 336 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 SPPL2CQ8IUH8 684 aa15□□□□□ -0.01
COL5A1-208ENST00000618395 GPER1Q99527 375 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms