RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 ATP5BP06576 529 aaKnown RBP17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 ALPIP09923 528 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 ESRRAP11474 423 aaPredicted RBP17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 TFEBP19484 476 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 CALB2P22676 271 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 FMO4P31512 558 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 MC4RP32245 332 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 ACAP2Q15057 778 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 CFAP157Q5JU67 520 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 ARMC12Q5T9G4 340 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 ZNF697Q5TEC3 545 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 PSAPL1Q6NUJ1 521 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 TMEM25Q86YD3 366 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 PIANPQ8IYJ0 282 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 MAPK15Q8TD08 544 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 LPGAT1Q92604 370 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 RAB3IPQ96QF0 476 aaPredicted RBP17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 MIPEPQ99797 713 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 ALG9Q9H6U8 611 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 ZNF711Q9Y462 761 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 MYOFQ9NZM1 2061 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 ZNF821O75541 412 aaPredicted RBP17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 RBP1P09455 135 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 HLA-FP30511 346 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 STK19P49842 368 aaPredicted RBP17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 PITRM1Q5JRX3 1037 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 TRIM67Q6ZTA4 783 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 LYSMD3Q7Z3D4 306 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 LONP2Q86WA8 852 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 PIH1D2Q8WWB5 315 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 LMLNQ96KR4 655 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 ZDHHC2Q9UIJ5 367 aa17.32■□□□□ 0.36
PCDHGC3-205ENST00000617641 A8MT66 165 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 PRR5-ARHGAP8B1AHC4 643 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 ZBTB14O43829 449 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 NDUFS3O75489 264 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 CPA2P48052 419 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 PLK1P53350 603 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 ARHGAP8P85298 464 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 ASPHQ12797 758 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 PEX6Q13608 980 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 SLC9B1Q4ZJI4 515 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 ZRANB3Q5FWF4 1079 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 DGKKQ5KSL6 1271 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 EPGNQ6UW88 154 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 RINLQ6ZS11 566 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 HOMEZQ8IX15 550 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 EID2BQ96D98 161 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 TDP1Q9NUW8 608 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 HACD3Q9P035 362 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 NOTCH4Q99466 2003 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 ATP6V1G2O95670 118 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 HOXB8P17481 243 aaPredicted RBP17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 DDX6P26196 483 aaKnown RBP eCLIP17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 SLC26A3P40879 764 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 KCNC1P48547 511 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 RPL14P50914 215 aaKnown RBP17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 SUOXP51687 545 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 DNAJB13P59910 316 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 C1QTNF8P60827 252 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 BCL2L1Q07817 233 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 ILF2Q12905 390 aaKnown RBP17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 ARHGAP15Q53QZ3 475 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 ASTLQ6HA08 431 aaPredicted RBP17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 ISCA2Q86U28 154 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 RYBPQ8N488 228 aaPredicted RBP17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 PTERQ96BW5 349 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 GPR63Q9BZJ6 419 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 PDE4DIPQ5VU43 2346 aa17.31■□□□□ 0.36
PCDHGC3-205ENST00000617641 NEDD8-MDP1E9PL57 170 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 PER2O15055 1255 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 GPR39O43194 453 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 CLASP2O75122 1294 aaKnown RBP17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 SRP72O76094 671 aaKnown RBP17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 RHOBTB1O94844 696 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 FGF19O95750 216 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 HSPA1AP0DMV8 641 aaKnown RBP17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 HSPA1BP0DMV9 641 aaKnown RBP17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 ZNF37AP17032 561 aaPredicted RBP17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 PRKAA1Q13131 559 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 PDAP1Q13442 181 aaKnown RBP17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 FUT11Q495W5 492 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 PAF1Q8N7H5 531 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 PHF21BQ96EK2 531 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 TCF12Q99081 682 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 BTBD10Q9BSF8 475 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 IL17CQ9P0M4 197 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 BAIAP2L1Q9UHR4 511 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 FAM50BQ9Y247 325 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 MED16Q9Y2X0 877 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 HCFC2Q9Y5Z7 792 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 CHD9Q3L8U1 2897 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 MATN2O00339 956 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 OR1I1O60431 355 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 NPHS1O60500 1241 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 IPO13O94829 963 aaKnown RBP17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 IGSF6O95976 241 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 SRCP12931 536 aa17.3■□□□□ 0.36
PCDHGC3-205ENST00000617641 CD1DP15813 335 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms