RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 ZNF786Q8N393 782 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 ANKRD49Q8WVL7 239 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 ABTB1Q969K4 478 aaPredicted RBP14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 CCDC138Q96M89 665 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 SLC22A12Q96S37 553 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 PRPF18Q99633 342 aaKnown RBP14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 SLC25A51Q9H1U9 297 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 RERGLQ9H628 205 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 NSMCE4AQ9NXX6 385 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 PKD2L2Q9NZM6 624 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 TDRKHQ9Y2W6 561 aaKnown RBP14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 TIPRLO75663 272 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 T-ENOLP0DO92 83 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 FGF3P11487 239 aaPredicted RBP14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 ANPEPP15144 967 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 MAP4P27816 1152 aaKnown RBP14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 NTHL1P78549 312 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 PREPLQ4J6C6 727 aaPredicted RBP14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 ZNF648Q5T619 568 aaPredicted RBP14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 FBXO30Q8TB52 745 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 RNF145Q96MT1 663 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 DDX18Q9NVP1 670 aaKnown RBP14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 TMEM161AQ9NX61 479 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 SPASTQ9UBP0 616 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 RREB1Q92766 1687 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 TRPC5OSA6NMA1 111 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 E7ESA3 106 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 ITGALP20701 1170 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 RGS4P49798 205 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 CCNG1P51959 295 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 GALNT2Q10471 571 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 C18orf21Q32NC0 220 aaPredicted RBP14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 C16orf89Q6UX73 402 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 RSPO2Q6UXX9 243 aaPredicted RBP14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 LYSMD3Q7Z3D4 306 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 TRMT11Q7Z4G4 463 aaKnown RBP14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 NPAS4Q8IUM7 802 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 DSELQ8IZU8 1212 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 TXNDC5Q8NBS9 432 aaKnown RBP14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 KCTD13Q8WZ19 329 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 SDCCAG3Q96C92 435 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 MRGPRX2Q96LB1 330 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 TSSK3Q96PN8 268 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 OLFM1Q99784 485 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 RAP2CQ9Y3L5 183 aa14.81□□□□□ -0.04
TNFRSF11A-206ENST00000617039 UNC80Q8N2C7 3258 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 COCHO43405 550 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 SLC25A14O95258 325 aaPredicted RBP14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 STATHP02808 62 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 KCNA5P22460 613 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 AQP1P29972 269 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 PPARGP37231 505 aaPredicted RBP14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 HNRNPDQ14103 355 aaKnown RBP14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 PAFAH1B3Q15102 231 aaKnown RBP14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 ATP6AP1LQ52LC2 224 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 MTX3Q5HYI7 312 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 PGBD3Q8N328 593 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 CIB1Q99828 191 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 RTP3Q9BQQ7 232 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 ALG2Q9H553 416 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 RUBCNLQ9H714 662 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 F8W8V4 182 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 GABRDO14764 452 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 IPO13O94829 963 aaKnown RBP14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 OR4F21O95013 312 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 PCDH8O95206 1070 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 CLDN7O95471 211 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 IL1BP01584 269 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 ATP6V1B2P21281 511 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 LPOP22079 712 aaPredicted RBP14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 RGRP47804 291 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 HMGCS1Q01581 520 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 ACOX1Q15067 660 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 FAM126BQ8IXS8 530 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 SYTL1Q8IYJ3 562 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 ST13P4Q8IZP2 240 aaPredicted RBP14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 MYO1HQ8N1T3 1032 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 RNF31Q96EP0 1072 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 POLR3BQ9NW08 1133 aaPredicted RBP14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 VPS4AQ9UN37 437 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 PRKAB1Q9Y478 270 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 TMCC1O94876 653 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 PRAMEF1O95521 474 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 ZNF682O95780 498 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 MLNP12872 115 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 GM2AP17900 193 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 RPL38P63173 70 aaKnown RBP14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 TRAPPC5Q8IUR0 188 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 FIBCD1Q8N539 461 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 UTP4Q969X6 686 aaKnown RBP14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 PRKD2Q9BZL6 878 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 DYRK4Q9NR20 520 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 SUFUQ9UMX1 484 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 AHCTF1Q8WYP5 2266 aa14.8□□□□□ -0.04
TNFRSF11A-206ENST00000617039 SHROOM3Q8TF72 1996 aa14.79□□□□□ -0.04
TNFRSF11A-206ENST00000617039 AP3B1O00203 1094 aa14.79□□□□□ -0.04
TNFRSF11A-206ENST00000617039 CASQ2O14958 399 aaPredicted RBP14.79□□□□□ -0.04
TNFRSF11A-206ENST00000617039 CABYRO75952 493 aa14.79□□□□□ -0.04
TNFRSF11A-206ENST00000617039 RFX3P48380 749 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms