RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 H3BMM5 538 aa13.19□□□□□ -0.3
PPP4R3B-206ENST00000616407 MGEA5O60502 916 aa13.19□□□□□ -0.3
PPP4R3B-206ENST00000616407 TLE2Q04725 743 aa13.19□□□□□ -0.3
PPP4R3B-206ENST00000616407 CYP51A1Q16850 503 aa13.19□□□□□ -0.3
PPP4R3B-206ENST00000616407 PAQR9Q6ZVX9 377 aa13.19□□□□□ -0.3
PPP4R3B-206ENST00000616407 REM2Q8IYK8 340 aaPredicted RBP13.19□□□□□ -0.3
PPP4R3B-206ENST00000616407 MCOLN3Q8TDD5 553 aa13.19□□□□□ -0.3
PPP4R3B-206ENST00000616407 ERLEC1Q96DZ1 483 aa13.19□□□□□ -0.3
PPP4R3B-206ENST00000616407 OR52B2Q96RD2 323 aa13.19□□□□□ -0.3
PPP4R3B-206ENST00000616407 SPAG4Q9NPE6 437 aa13.19□□□□□ -0.3
PPP4R3B-206ENST00000616407 GNPTGQ9UJJ9 305 aa13.19□□□□□ -0.3
PPP4R3B-206ENST00000616407 AP4S1Q9Y587 144 aa13.19□□□□□ -0.3
PPP4R3B-206ENST00000616407 KANSL1LA0AUZ9 987 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 UBXN8O00124 270 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 TRIM38O00635 465 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 DLX3O60479 287 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 POLR2EP19388 210 aaKnown RBP13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 FGFR3P22607 806 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 FASP25445 335 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 PPM1AP35813 382 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 GRIA3P42263 894 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 PFKPQ01813 784 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 NRF1Q16656 503 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 PRMT9Q6P2P2 845 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 ADAMTSL2Q86TH1 951 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 TMEM135Q86UB9 458 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 C2orf15Q8WU43 125 aaKnown RBP13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 AUTS2Q8WXX7 1259 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 ESAMQ96AP7 390 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 TMEM159Q96B96 161 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 NSMCE2Q96MF7 247 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 BBS2Q9BXC9 721 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 MTF2Q9Y483 593 aaPredicted RBP13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 BRWD3Q6RI45 1802 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 ENPP3O14638 875 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 ALBP02768 609 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 WLSQ5T9L3 541 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 SLC30A9Q6PML9 568 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 MRPL10Q7Z7H8 261 aaKnown RBP13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 DLG3Q92796 817 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 KHSRPQ92945 711 aaKnown RBP eCLIP13.18□□□□□ -0.33e-7■■■■□ 23.8
PPP4R3B-206ENST00000616407 FEM1CQ96JP0 617 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 ZNHIT2Q9UHR6 403 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 SBF2Q86WG5 1849 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 ZNF839A8K0R7 811 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 ZBTB14O43829 449 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 NRP2O60462 931 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 SH3BGRLO75368 114 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 LAG3P18627 525 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 ATXN7L2Q5T6C5 722 aaPredicted RBP13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 AAGABQ6PD74 315 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 MED8Q96G25 268 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 WASF2Q9Y6W5 498 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 LRRC37AA6NMS7 1700 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 ANXA5P08758 320 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 HAPLN1P10915 354 aaPredicted RBP13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 FGF3P11487 239 aaPredicted RBP13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 SLC7A2P52569 658 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 LPCAT4Q643R3 524 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 TMEM199Q8N511 208 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 C19orf60Q96EN9 201 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 PRPF18Q99633 342 aaKnown RBP13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 TNKS2Q9H2K2 1166 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 SLC7A8Q9UHI5 535 aa13.18□□□□□ -0.3
PPP4R3B-206ENST00000616407 CLPTM1O96005 669 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 CYP2A7P20853 494 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 PTPRCAPQ14761 206 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 TSNQ15631 228 aaKnown RBP13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 DNAJB7Q7Z6W7 309 aaPredicted RBP13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 RBFAQ8N0V3 343 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 ZNF555Q8NEP9 628 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 TMEM79Q9BSE2 394 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 S100A14Q9HCY8 104 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 KIAA1522Q9P206 1035 aaPredicted RBP13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 C9JVG2 144 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 MAFKO60675 156 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 COL6A1P12109 1028 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 CCNFP41002 786 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 STARD3Q14849 445 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 ACOX1Q15067 660 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 ADGRF1Q5T601 910 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 CYS1Q717R9 158 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 TNIP2Q8NFZ5 429 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 FIG4Q92562 907 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 CDKN2AIPNLQ96HQ2 116 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 RGS14O43566 566 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 XYLBO75191 536 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 MAGEA11P43364 429 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 OTUD3Q5T2D3 398 aaPredicted RBP13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 CACUL1Q86Y37 369 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 CNTD1Q8N815 330 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 NAT16Q8N8M0 369 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 PLD4Q96BZ4 506 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 FAM120BQ96EK7 910 aaKnown RBP13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 MOCOSQ96EN8 888 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 RPL10LQ96L21 214 aaKnown RBP13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 RNF145Q96MT1 663 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 COPS8Q99627 209 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms