RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 VANGL1Q8TAA9 524 aaPredicted RBP13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 STON2Q8WXE9 905 aa13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 TIGARQ9NQ88 270 aa13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 ERI2A8K979 691 aaKnown RBP13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 SPANXN3Q5MJ09 141 aa13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 AGAP6Q5VW22 663 aa13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 FSTL4Q6MZW2 842 aa13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 TMEM102Q8N9M5 508 aaPredicted RBP13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 PPHLN1Q8NEY8 458 aaKnown RBP13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 DEDD2Q8WXF8 326 aa13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 AGAP4Q96P64 663 aa13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 CAMKK2Q96RR4 588 aa13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 MLXQ9UH92 298 aa13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 PCDHB3Q9Y5E6 796 aa13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 NFAT5O94916 1531 aa13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 AQP12BA6NM10 295 aa13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 ETV3P41162 512 aa13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 CYP4F8P98187 520 aa13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 FAM131BQ86XD5 332 aa13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 AQP12AQ8IXF9 295 aa13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 FNDC5Q8NAU1 212 aa13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 TMBIM1Q969X1 311 aa13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 RPF1Q9H9Y2 349 aaKnown RBP13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 EMC3Q9P0I2 261 aa13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 FARP1Q9Y4F1 1045 aaPredicted RBP13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 TLL2Q9Y6L7 1015 aa13.55□□□□□ -0.24
PPP4R3B-205ENST00000616288 C3P01024 1663 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 NEMP2A6NFY4 417 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 UPK1BO75841 260 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 SNX4O95219 450 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 SERPINA1P01009 418 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 C8BP07358 591 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 NPY2RP49146 381 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 RARRES1P49788 294 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 EFR3AQ14156 821 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 GRM3Q14832 879 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 TIMM50Q3ZCQ8 353 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 CUZD1Q86UP6 607 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 ZNF518BQ9C0D4 1074 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 NANOGQ9H9S0 305 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 ZNF556Q9HAH1 456 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 KATNA1O75449 491 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 PIM1P11309 404 aaPredicted RBP13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 ADORA2BP29275 332 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 RECQLP46063 649 aaPredicted RBP13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 GPR162Q16538 588 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 ZNF181Q2M3W8 571 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 EIF3MQ7L2H7 374 aaKnown RBP13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 TXNRD3Q86VQ6 643 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 CELF2-AS1Q8N7Q2 184 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 OR13J1Q8NGT2 312 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 SYTL5Q8TDW5 730 aaPredicted RBP13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 DIRAS2Q96HU8 199 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 LGMNQ99538 433 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 SLA2Q9H6Q3 261 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 LRRC4Q9HBW1 653 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 PSAT1Q9Y617 370 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 PLK4O00444 970 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 PMPCBO75439 489 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 IL1BP01584 269 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 PRKACGP22612 351 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 ATP5F1P24539 256 aaPredicted RBP13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 ZNF135P52742 658 aaPredicted RBP13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 CTBP1Q13363 440 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 GRIK5Q16478 980 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 Q3C1V9 767 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 C6orf141Q5SZD1 244 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 FAM120BQ96EK7 910 aaKnown RBP13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 TEKT5Q96M29 485 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 FARSBQ9NSD9 589 aaKnown RBP13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 DMAC2Q9NW81 257 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 SCAF8Q9UPN6 1271 aaKnown RBP13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 DIP2CQ9Y2E4 1556 aa13.54□□□□□ -0.24
PPP4R3B-205ENST00000616288 CHRNA1P02708 482 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 FGRP09769 529 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 CYP19A1P11511 503 aaPredicted RBP13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 LBPP18428 481 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 CDH8P55286 799 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 SNRPFP62306 86 aaKnown RBP13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 CNSTQ6PJW8 725 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 PLD6Q8N2A8 252 aaKnown RBP13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 AGAP2Q99490 1192 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 KATNAL1Q9BW62 490 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 KCNH7Q9NS40 1196 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 INTS10Q9NVR2 710 aaKnown RBP13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 CNTN3Q9P232 1028 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 DUSP12Q9UNI6 340 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 FAM95CA0A1B0GW59 222 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 H3BMM5 538 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 LINC00032P0C843 101 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 ADORA2AP29274 412 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 LGALS3BPQ08380 585 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 TRIM71Q2Q1W2 868 aaKnown RBP13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 LRIT3Q3SXY7 679 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 NOXA1Q86UR1 476 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 CMTR2Q8IYT2 770 aaKnown RBP13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 ABI1Q8IZP0 508 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 TSPAN17Q96FV3 270 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 DHRS9Q9BPW9 319 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 HOXD1Q9GZZ0 328 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms