RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 GJD3Q8N144 294 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 TERB1Q8NA31 727 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 LINGO1Q96FE5 620 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 ZNF607Q96SK3 696 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 DPEP2Q9H4A9 486 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 DPEP3Q9H4B8 488 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 RNF19AQ9NV58 838 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 DMAC2Q9NW81 257 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 CALML5Q9NZT1 146 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 DUSP12Q9UNI6 340 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 CFL2Q9Y281 166 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 DGKIO75912 1065 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 RPL14P50914 215 aaKnown RBP9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 CLEC20AQ6ZU45 233 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 LUZP2Q86TE4 346 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 OR52L1Q8NGH7 329 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 DLG3Q92796 817 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 SEMA4DQ92854 862 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 GFM2Q969S9 779 aaKnown RBP9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 NXPE3Q969Y0 559 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 COL26A1Q96A83 441 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 ZIM3Q96PE6 472 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 C16orf70Q9BSU1 422 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 TCF7L2Q9NQB0 619 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 NINJ2Q9NZG7 142 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 GABRDO14764 452 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 KDELR3O43731 214 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 SERPINB7O75635 380 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 CNMDO75829 334 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 CYP7B1O75881 506 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 ESR1P03372 595 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 RUNX1T1Q06455 604 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 VPS26BQ4G0F5 336 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 SNAP47Q5SQN1 464 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 PDSS1Q5T2R2 415 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 CNSTQ6PJW8 725 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 IFNLR1Q8IU57 520 aaPredicted RBP9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 SLC41A1Q8IVJ1 513 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 RAD51AP1Q96B01 352 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 P2RY11Q96G91 374 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 GDE1Q9NZC3 331 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 MARCOQ9UEW3 520 aaPredicted RBP9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 MYBPHLA2RUH7 354 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 VSTM5A8MXK1 200 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 FSCN2O14926 492 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 TSPAN6O43657 245 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 UBXN11Q5T124 520 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 MSANTD2Q6P1R3 559 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 ARCQ7LC44 396 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 SPATA19Q7Z5L4 167 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 DPP10Q8N608 796 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 DCAF4L2Q8NA75 395 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 HLA-CQ95604 372 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 KLHDC7BQ96G42 594 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 GTPBP2Q9BX10 602 aaKnown RBP9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 PNMA8BQ9ULN7 279 aaPredicted RBP9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 COG5Q9UP83 839 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 COQ4Q9Y3A0 265 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 RRP15Q9Y3B9 282 aaKnown RBP9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 UPK3BL1B0FP48 263 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 UPK3BL2E5RIL1 263 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 CNOT3O75175 753 aaKnown RBP9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 AP2A1O95782 977 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 KLK3P07288 261 aaPredicted RBP9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 NR1D2Q14995 579 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 SULT1C3Q6IMI6 304 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 TRIM40Q6P9F5 258 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 RFWD3Q6PCD5 774 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 NPNTQ6UXI9 565 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 AMZ2Q86W34 360 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 MAPK15Q8TD08 544 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 EME1Q96AY2 570 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 ZNF641Q96N77 438 aaPredicted RBP9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 KLF6Q99612 283 aaPredicted RBP9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 SLITRK2Q9H156 845 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 FBXO6Q9NRD1 293 aaPredicted RBP9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 USP54Q70EL1 1684 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 MAST2Q6P0Q8 1798 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 DHX15O43143 795 aaKnown RBP9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 CCNYL3P0C7X3 344 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 CALB2P22676 271 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 CNGA3Q16281 694 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 KIAA1161Q6NSJ0 714 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 ZNF549Q6P9A3 640 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 TMEM26Q6ZUK4 368 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 TMC3Q7Z5M5 1100 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 LONP2Q86WA8 852 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 RASGRP3Q8IV61 690 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 ITCHQ96J02 903 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 RACGAP1Q9H0H5 632 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 SGK2Q9HBY8 427 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 PRDM8Q9NQV8 689 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 SLC12A4Q9UP95 1085 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 NRAPQ86VF7 1730 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 KMOO15229 486 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 RHOP08100 348 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 UPP1Q16831 310 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 CYP2U1Q7Z449 544 aa9.72□□□□□ -0.85
TNFRSF9-204ENST00000615230 LRRTM4Q86VH4 590 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms