RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 VARS2Q5ST30 1063 aaKnown RBP10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 CHSY3Q70JA7 882 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PIWIL4Q7Z3Z4 852 aaKnown RBP10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TDRD5Q8NAT2 981 aaKnown RBP10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ACVR1CQ8NER5 493 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 RP9Q8TA86 221 aaKnown RBP10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 FAM110BQ8TC76 370 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 EXT2Q93063 718 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TSPAN17Q96FV3 270 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TRMT13Q9NUP7 481 aaKnown RBP10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 THEGQ9P2T0 379 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TADA2AO75478 443 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 KCNH1O95259 989 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 CAPNS1P04632 268 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 MAGP20916 626 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 SERPINH1P50454 418 aaKnown RBP10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 MAPK11Q15759 364 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 BNC2Q6ZN30 1099 aaPredicted RBP10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 FSTL5Q8N475 847 aaPredicted RBP10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 FEM1CQ96JP0 617 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TSNARE1Q96NA8 513 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TLR8Q9NR97 1041 aaKnown RBP10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 RSL24D1Q9UHA3 163 aaKnown RBP10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PCDHGA4Q9Y5G9 962 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 FAM95CA0A1B0GW59 222 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 A0A1W2PPW3 197 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ZNF839A8K0R7 811 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 MAN1A2O60476 641 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 MT-CYBP00156 380 aaPredicted RBP10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 THRAP10827 490 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 CES1P23141 567 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 SLC1A2P43004 574 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 WNT3AP56704 352 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PLIN5Q00G26 463 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TRAF2Q12933 501 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 SERINC3Q13530 473 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 USP10Q14694 798 aaKnown RBP10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ACAP2Q15057 778 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PLCL1Q15111 1095 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ESRP1Q6NXG1 681 aaKnown RBP10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 SLC7A5P1Q8MH63 180 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 CASD1Q96PB1 797 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 CYP2S1Q96SQ9 504 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TCF7L2Q9NQB0 619 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 H7C4K7 107 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ATXN1LP0C7T5 689 aaKnown RBP10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 OCM2P0CE71 109 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 OCMP0CE72 109 aaPredicted RBP10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 HAPLN1P10915 354 aaPredicted RBP10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 YWHAQP27348 245 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 MTTPP55157 894 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 GEN1Q17RS7 908 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ZNF280DQ6N043 979 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 GK5Q6ZS86 529 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 RBM12BQ8IXT5 1001 aaKnown RBP10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 DSELQ8IZU8 1212 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PSD4Q8NDX1 1056 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 OR13J1Q8NGT2 312 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 L3HYPDHQ96EM0 354 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ABHD8Q96I13 439 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 SLC45A3Q96JT2 553 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TRMOQ9BU70 441 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 CCDC167Q9P0B6 97 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 FBXO5Q9UKT4 447 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 SLC39A10Q9ULF5 831 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 NUP205Q92621 2012 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 RGSL1A5PLK6 1076 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TTC36A6NLP5 189 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 LSM1O15116 133 aaKnown RBP10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TPD52L2O43399 206 aaKnown RBP10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 DLX3O60479 287 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 RNASEH2AO75792 299 aaKnown RBP10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 VNN2O95498 520 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ATP5F1P24539 256 aaPredicted RBP10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 GRIA4P48058 902 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 NAGLUP54802 743 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 DMPKQ09013 629 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TECRLQ5HYJ1 363 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 HABP4Q5JVS0 413 aaKnown RBP10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 C1QTNF12Q5T7M4 302 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 MARC1Q5VT66 337 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 NEPROQ6NW34 567 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 CEP97Q8IW35 865 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PELI3Q8N2H9 469 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 NAA50Q9GZZ1 169 aaKnown RBP10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 NMRK2Q9NPI5 230 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 WDR70Q9NW82 654 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 SRRDQ9UH36 339 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 EGFL7Q9UHF1 273 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 RUVBL2Q9Y230 463 aaKnown RBP10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 GBF1Q92538 1859 aa10.86□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 MSI1O43347 362 aaKnown RBP10.85□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 HOXA2O43364 376 aa10.85□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PRAMEF11O60813 436 aa10.85□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ZBTB11O95625 1053 aaPredicted RBP10.85□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 RBP1P09455 135 aa10.85□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TFEBP19484 476 aa10.85□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 HLA-DPA1P20036 260 aa10.85□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 NFKBIAP25963 317 aa10.85□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 HOXD10P28358 340 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms