RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 EDEM2Q9BV94 578 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 TUBB2BQ9BVA1 445 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 GTPBP2Q9BX10 602 aaKnown RBP13.25□□□□□ -0.29
MDC1-209ENST00000613547 MBNL1Q9NR56 388 aaKnown RBP13.25□□□□□ -0.29
MDC1-209ENST00000613547 PCYOX1Q9UHG3 505 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 CA5BQ9Y2D0 317 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 SPO11Q9Y5K1 396 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 RIF1Q5UIP0 2472 aaKnown RBP13.25□□□□□ -0.29
MDC1-209ENST00000613547 SDK1Q7Z5N4 2213 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.24□□□□□ -0.29
MDC1-209ENST00000613547 POM121BA6NF01 834 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 H0Y8X5 98 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 DFNA5O60443 496 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 PPFIA2O75334 1257 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 SUN1O94901 812 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 WNT1P04628 370 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 C1SP09871 688 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 TSHRP16473 764 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 HTR1BP28222 390 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 HMGCLP35914 325 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 NXPH1P58417 271 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 DR1Q01658 176 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 DPTQ07507 201 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 DHX34Q14147 1143 aaKnown RBP13.24□□□□□ -0.29
MDC1-209ENST00000613547 PTK2BQ14289 1009 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 INPP5AQ14642 412 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 TAF1AQ15573 450 aaPredicted RBP13.24□□□□□ -0.29
MDC1-209ENST00000613547 CDKN3Q16667 212 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 WHAMMP3Q1A5X7 153 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 KIF19Q2TAC6 998 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 LAYNQ6UX15 382 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 TMC3Q7Z5M5 1100 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 TECPR1Q7Z6L1 1165 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 ALYREFQ86V81 257 aaKnown RBP13.24□□□□□ -0.29
MDC1-209ENST00000613547 NLRP8Q86W28 1048 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 OXR1Q8N573 874 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 BRSK1Q8TDC3 778 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 AP2M1Q96CW1 435 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 BMFQ96LC9 184 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 FAM83DQ9H4H8 585 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 WDR26Q9H7D7 661 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 ASIC3Q9UHC3 531 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 CDC23Q9UJX2 597 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 PKP3Q9Y446 797 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 GVINP1Q7Z2Y8 2422 aa13.24□□□□□ -0.29
MDC1-209ENST00000613547 A0A0U1RQS6 177 aa13.23□□□□□ -0.29
MDC1-209ENST00000613547 CACNB4O00305 520 aaPredicted RBP13.23□□□□□ -0.29
MDC1-209ENST00000613547 PDE2AO00408 941 aaPredicted RBP13.23□□□□□ -0.29
MDC1-209ENST00000613547 STX7O15400 261 aaKnown RBP13.23□□□□□ -0.29
MDC1-209ENST00000613547 GM2AP17900 193 aa13.23□□□□□ -0.29
MDC1-209ENST00000613547 TGM1P22735 817 aa13.23□□□□□ -0.29
MDC1-209ENST00000613547 KELP23276 732 aa13.23□□□□□ -0.29
MDC1-209ENST00000613547 ADCY8P40145 1251 aa13.23□□□□□ -0.29
MDC1-209ENST00000613547 CTSKP43235 329 aa13.23□□□□□ -0.29
MDC1-209ENST00000613547 GPR1P46091 355 aa13.23□□□□□ -0.29
MDC1-209ENST00000613547 SPINT3P49223 89 aa13.23□□□□□ -0.29
MDC1-209ENST00000613547 ARRB1P49407 418 aaPredicted RBP13.23□□□□□ -0.29
MDC1-209ENST00000613547 DCDC1P59894 354 aa13.23□□□□□ -0.29
MDC1-209ENST00000613547 PFN3P60673 137 aa13.23□□□□□ -0.29
MDC1-209ENST00000613547 OLIG2Q13516 323 aa13.23□□□□□ -0.29
MDC1-209ENST00000613547 LAMB3Q13751 1172 aa13.23□□□□□ -0.29
MDC1-209ENST00000613547 PDE1CQ14123 709 aaPredicted RBP13.23□□□□□ -0.29
MDC1-209ENST00000613547 RAET1GQ6H3X3 334 aa13.23□□□□□ -0.29
MDC1-209ENST00000613547 DENND5AQ6IQ26 1287 aa13.23□□□□□ -0.29
MDC1-209ENST00000613547 KIAA2013Q8IYS2 634 aa13.23□□□□□ -0.29
MDC1-209ENST00000613547 SPATA4Q8NEY3 305 aa13.23□□□□□ -0.29
MDC1-209ENST00000613547 ABCG8Q9H221 673 aa13.23□□□□□ -0.29
MDC1-209ENST00000613547 ERVMER34-1Q9H9K5 563 aa13.23□□□□□ -0.29
MDC1-209ENST00000613547 TMEM9BQ9NQ34 198 aa13.23□□□□□ -0.29
MDC1-209ENST00000613547 PHPT1Q9NRX4 125 aaPredicted RBP13.23□□□□□ -0.29
MDC1-209ENST00000613547 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.23□□□□□ -0.29
MDC1-209ENST00000613547 CD84Q9UIB8 345 aa13.23□□□□□ -0.29
MDC1-209ENST00000613547 SNX11Q9Y5W9 270 aa13.23□□□□□ -0.29
MDC1-209ENST00000613547 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.23□□□□□ -0.29
MDC1-209ENST00000613547 SPTY2D1-AS1A0A0U1RR47 76 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 YKT6O15498 198 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 TPSB2P20231 275 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 LPOP22079 712 aaPredicted RBP13.22□□□□□ -0.29
MDC1-209ENST00000613547 TEAD1P28347 426 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 ARHGAP8P85298 464 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 PTK6Q13882 451 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 SEPT6Q14141 434 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 TPSAB1Q15661 275 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 HLA-BQ31612 363 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 PNCKQ6P2M8 343 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 MAATS1Q7Z4T9 603 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 PARGQ86W56 976 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 JAMLQ86YT9 394 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 TTC30BQ8N4P2 665 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 MINDY1Q8N5J2 469 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 MNS1Q8NEH6 495 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 OR52K1Q8NGK4 314 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 SCAMP4Q969E2 229 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 PLEKHG4BQ96PX9 1271 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 KRT12Q99456 494 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 ELF4Q99607 663 aaPredicted RBP13.22□□□□□ -0.29
MDC1-209ENST00000613547 ZSCAN5AQ9BUG6 496 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 APOOQ9BUR5 198 aa13.22□□□□□ -0.29
MDC1-209ENST00000613547 RIOK2Q9BVS4 552 aaKnown RBP13.22□□□□□ -0.29
MDC1-209ENST00000613547 SPATA16Q9BXB7 569 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms