RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 TBL1YQ9BQ87 522 aa16.6■□□□□ 0.25
IRF1-211ENST00000613424 ABCG8Q9H221 673 aa16.6■□□□□ 0.25
IRF1-211ENST00000613424 ERVMER34-1Q9H9K5 563 aa16.6■□□□□ 0.25
IRF1-211ENST00000613424 GPR27Q9NS67 375 aa16.6■□□□□ 0.25
IRF1-211ENST00000613424 DNAAF2Q9NVR5 837 aaKnown RBP16.6■□□□□ 0.25
IRF1-211ENST00000613424 GOLGA6AQ9NYA3 693 aa16.6■□□□□ 0.25
IRF1-211ENST00000613424 PAK5Q9P286 719 aa16.6■□□□□ 0.25
IRF1-211ENST00000613424 CD84Q9UIB8 345 aa16.6■□□□□ 0.25
IRF1-211ENST00000613424 ZNF711Q9Y462 761 aa16.6■□□□□ 0.25
IRF1-211ENST00000613424 TOR1BO14657 336 aa16.59■□□□□ 0.25
IRF1-211ENST00000613424 AURKAO14965 403 aa16.59■□□□□ 0.25
IRF1-211ENST00000613424 PSMD3O43242 534 aa16.59■□□□□ 0.25
IRF1-211ENST00000613424 USP12O75317 370 aa16.59■□□□□ 0.25
IRF1-211ENST00000613424 CER1O95813 267 aa16.59■□□□□ 0.25
IRF1-211ENST00000613424 SPINT3P49223 89 aa16.59■□□□□ 0.25
IRF1-211ENST00000613424 MTM1Q13496 603 aa16.59■□□□□ 0.25
IRF1-211ENST00000613424 KCTD19Q17RG1 926 aaPredicted RBP16.59■□□□□ 0.25
IRF1-211ENST00000613424 TPRG1LQ5T0D9 272 aa16.59■□□□□ 0.25
IRF1-211ENST00000613424 DENND5AQ6IQ26 1287 aa16.59■□□□□ 0.25
IRF1-211ENST00000613424 ESRP1Q6NXG1 681 aaKnown RBP16.59■□□□□ 0.25
IRF1-211ENST00000613424 PNCKQ6P2M8 343 aa16.59■□□□□ 0.25
IRF1-211ENST00000613424 NRSN1Q8IZ57 195 aa16.59■□□□□ 0.25
IRF1-211ENST00000613424 PDCD7Q8N8D1 485 aaKnown RBP16.59■□□□□ 0.25
IRF1-211ENST00000613424 NETO1Q8TDF5 533 aa16.59■□□□□ 0.25
IRF1-211ENST00000613424 ELF4Q99607 663 aaPredicted RBP16.59■□□□□ 0.25
IRF1-211ENST00000613424 APOOQ9BUR5 198 aa16.59■□□□□ 0.25
IRF1-211ENST00000613424 GPR63Q9BZJ6 419 aa16.59■□□□□ 0.25
IRF1-211ENST00000613424 ARNT2Q9HBZ2 717 aa16.59■□□□□ 0.25
IRF1-211ENST00000613424 RAB6BQ9NRW1 208 aa16.59■□□□□ 0.25
IRF1-211ENST00000613424 OR1A2Q9Y585 309 aa16.59■□□□□ 0.25
IRF1-211ENST00000613424 TMEM131Q92545 1883 aa16.59■□□□□ 0.25
IRF1-211ENST00000613424 GOLGA6L10A0A0M3HER8 536 aa16.58■□□□□ 0.24
IRF1-211ENST00000613424 SPTY2D1-AS1A0A0U1RR47 76 aa16.58■□□□□ 0.24
IRF1-211ENST00000613424 K7ESM1 405 aa16.58■□□□□ 0.24
IRF1-211ENST00000613424 DFNA5O60443 496 aa16.58■□□□□ 0.24
IRF1-211ENST00000613424 PHF2O75151 1096 aa16.58■□□□□ 0.24
IRF1-211ENST00000613424 AP2A1O95782 977 aa16.58■□□□□ 0.24
IRF1-211ENST00000613424 TRIM23P36406 574 aa16.58■□□□□ 0.24
IRF1-211ENST00000613424 DPTQ07507 201 aa16.58■□□□□ 0.24
IRF1-211ENST00000613424 PDE1CQ14123 709 aaPredicted RBP16.58■□□□□ 0.24
IRF1-211ENST00000613424 UAP1L1Q3KQV9 507 aa16.58■□□□□ 0.24
IRF1-211ENST00000613424 CCDC137Q6PK04 289 aaKnown RBP16.58■□□□□ 0.24
IRF1-211ENST00000613424 C4orf22Q6V702 233 aa16.58■□□□□ 0.24
IRF1-211ENST00000613424 NYAP1Q6ZVC0 841 aa16.58■□□□□ 0.24
IRF1-211ENST00000613424 NLRP8Q86W28 1048 aa16.58■□□□□ 0.24
IRF1-211ENST00000613424 BLOC1S5Q8TDH9 187 aa16.58■□□□□ 0.24
IRF1-211ENST00000613424 SCAMP4Q969E2 229 aa16.58■□□□□ 0.24
IRF1-211ENST00000613424 LRRC45Q96CN5 670 aa16.58■□□□□ 0.24
IRF1-211ENST00000613424 AP2M1Q96CW1 435 aa16.58■□□□□ 0.24
IRF1-211ENST00000613424 TRABDQ9H4I3 376 aa16.58■□□□□ 0.24
IRF1-211ENST00000613424 LRRC40Q9H9A6 602 aa16.58■□□□□ 0.24
IRF1-211ENST00000613424 PKD2L2Q9NZM6 624 aa16.58■□□□□ 0.24
IRF1-211ENST00000613424 FNDC3AQ9Y2H6 1198 aaKnown RBP16.58■□□□□ 0.24
IRF1-211ENST00000613424 DMXL1Q9Y485 3027 aa16.58■□□□□ 0.24
IRF1-211ENST00000613424 A0A1B0GTQ1 180 aa16.57■□□□□ 0.24
IRF1-211ENST00000613424 RGSL1A5PLK6 1076 aa16.57■□□□□ 0.24
IRF1-211ENST00000613424 MSLNQ13421 630 aaPredicted RBP16.57■□□□□ 0.24
IRF1-211ENST00000613424 SEMA5AQ13591 1074 aa16.57■□□□□ 0.24
IRF1-211ENST00000613424 PTK2BQ14289 1009 aa16.57■□□□□ 0.24
IRF1-211ENST00000613424 FZD2Q14332 565 aa16.57■□□□□ 0.24
IRF1-211ENST00000613424 SHBQ15464 509 aa16.57■□□□□ 0.24
IRF1-211ENST00000613424 TRIP13Q15645 432 aaPredicted RBP16.57■□□□□ 0.24
IRF1-211ENST00000613424 RSPO4Q2I0M5 234 aaPredicted RBP16.57■□□□□ 0.24
IRF1-211ENST00000613424 ZNF765Q7L2R6 523 aa16.57■□□□□ 0.24
IRF1-211ENST00000613424 TTC30BQ8N4P2 665 aa16.57■□□□□ 0.24
IRF1-211ENST00000613424 FUBP1Q96AE4 644 aaKnown RBP16.57■□□□□ 0.24
IRF1-211ENST00000613424 FAM83DQ9H4H8 585 aa16.57■□□□□ 0.24
IRF1-211ENST00000613424 TM7SF3Q9NS93 570 aa16.57■□□□□ 0.24
IRF1-211ENST00000613424 HACD3Q9P035 362 aa16.57■□□□□ 0.24
IRF1-211ENST00000613424 RNF14Q9UBS8 474 aa16.57■□□□□ 0.24
IRF1-211ENST00000613424 TP53BP1Q12888 1972 aaPredicted RBP16.57■□□□□ 0.24
IRF1-211ENST00000613424 ERI2A8K979 691 aaKnown RBP16.56■□□□□ 0.24
IRF1-211ENST00000613424 E7EVH7 732 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 PDE2AO00408 941 aaPredicted RBP16.56■□□□□ 0.24
IRF1-211ENST00000613424 SUN1O94901 812 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 KRT14P02533 472 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 SLC4A1P02730 911 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 HOXC4P09017 264 aaPredicted RBP16.56■□□□□ 0.24
IRF1-211ENST00000613424 ZNF883P0CG24 379 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 TSHRP16473 764 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 HMGCLP35914 325 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 PAFAH1B1P43034 410 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 GPR1P46091 355 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 RXRGP48443 463 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 LMAN1P49257 510 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 FNTAP49354 379 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 THOP1P52888 689 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 IL9RQ01113 521 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 SLC14A1Q13336 389 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 ZNF542PQ5EBM4 170 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 RAET1GQ6H3X3 334 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 GLT6D1Q7Z4J2 308 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 OXR1Q8N573 874 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 GPR26Q8NDV2 337 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 C16orf45Q96MC5 204 aaPredicted RBP16.56■□□□□ 0.24
IRF1-211ENST00000613424 AGAP2Q99490 1192 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 RIOK2Q9BVS4 552 aaKnown RBP16.56■□□□□ 0.24
IRF1-211ENST00000613424 LGR4Q9BXB1 951 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 TEX101Q9BY14 249 aa16.56■□□□□ 0.24
IRF1-211ENST00000613424 DDX47Q9H0S4 455 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms