RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 PDHA1P08559 390 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 CCNB1P14635 433 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 PNLIPP16233 465 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 ZNF30P17039 623 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 KDELR1P24390 212 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 MLLT3P42568 568 aaPredicted RBP17.33■□□□□ 0.36
PRKN-209ENST00000612485 PDX1P52945 283 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 CCL7P80098 99 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 DSC2Q02487 901 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 GBE1Q04446 702 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 TLE3Q04726 772 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 MESDQ14696 234 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 C14orf28Q4W4Y0 310 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 CERCAMQ5T4B2 595 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 BROXQ5VW32 411 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 LRRC66Q68CR7 880 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 TECPR1Q7Z6L1 1165 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 ARL14Q8N4G2 192 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 PQLC3Q8N755 202 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 KIAA1524Q8TCG1 905 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 KCNE4Q8WWG9 221 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 HDAC11Q96DB2 347 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 LIN37Q96GY3 246 aaPredicted RBP17.33■□□□□ 0.36
PRKN-209ENST00000612485 NAF1Q96HR8 494 aaKnown RBP17.33■□□□□ 0.36
PRKN-209ENST00000612485 CCDC42Q96M95 316 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 SLC46A1Q96NT5 459 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 FCRL3Q96P31 734 aaPredicted RBP17.33■□□□□ 0.36
PRKN-209ENST00000612485 UBL7Q96S82 380 aaPredicted RBP17.33■□□□□ 0.36
PRKN-209ENST00000612485 TDRD1Q9BXT4 1180 aaKnown RBP17.33■□□□□ 0.36
PRKN-209ENST00000612485 GSDMCQ9BYG8 508 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 FRMD8Q9BZ67 464 aaPredicted RBP17.33■□□□□ 0.36
PRKN-209ENST00000612485 STRADBQ9C0K7 418 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 LRRN3Q9H3W5 708 aa17.33■□□□□ 0.36
PRKN-209ENST00000612485 A0A1W2PNU3 283 aaPredicted RBP17.32■□□□□ 0.36
PRKN-209ENST00000612485 EIF4E1BA6NMX2 242 aaKnown RBP17.32■□□□□ 0.36
PRKN-209ENST00000612485 D6RAR5 112 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 CASC3O15234 703 aaKnown RBP17.32■□□□□ 0.36
PRKN-209ENST00000612485 NOBOXO60393 691 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 CEACAM5P06731 702 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 PYGLP06737 847 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 ARHGAP25P42331 645 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 GPR1P46091 355 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 ILF3Q12906 894 aaKnown RBP eCLIP17.32■□□□□ 0.36
PRKN-209ENST00000612485 EIF3IQ13347 325 aaKnown RBP17.32■□□□□ 0.36
PRKN-209ENST00000612485 PEX6Q13608 980 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 PTPRRQ15256 657 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 FOXR1Q6PIV2 292 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 CCNJLQ8IV13 435 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 RHOT2Q8IXI1 618 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 CCDC13Q8IYE1 715 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.32■□□□□ 0.36
PRKN-209ENST00000612485 CCNYQ8ND76 341 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 CCL4L1Q8NHW4 92 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 SLC35G2Q8TBE7 412 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 GPBAR1Q8TDU6 330 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 RAPGEF5Q92565 580 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 AP2M1Q96CW1 435 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 CCDC97Q96F63 343 aaPredicted RBP17.32■□□□□ 0.36
PRKN-209ENST00000612485 TMEM74Q96NL1 305 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 RNF157Q96PX1 679 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 ANP32EQ9BTT0 268 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 DPH1Q9BZG8 443 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 NHEJ1Q9H9Q4 299 aaPredicted RBP17.32■□□□□ 0.36
PRKN-209ENST00000612485 TRNAU1APQ9NX07 287 aaKnown RBP17.32■□□□□ 0.36
PRKN-209ENST00000612485 DTLQ9NZJ0 730 aa17.32■□□□□ 0.36
PRKN-209ENST00000612485 SMG1Q96Q15 3661 aaKnown RBP17.32■□□□□ 0.36
PRKN-209ENST00000612485 A0A1W2PQM1 296 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 CAPN8A6NHC0 703 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 ZNF487B1APH4 448 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 NUDT21O43809 227 aaKnown RBP17.31■□□□□ 0.36
PRKN-209ENST00000612485 MFAP3LO75121 409 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 HLA-DQB2P05538 268 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 GNPDA1P46926 289 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 UCNP55089 124 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 INHBCP55103 352 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 RPL26P61254 145 aaKnown RBP17.31■□□□□ 0.36
PRKN-209ENST00000612485 PTSQ03393 145 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 HLTFQ14527 1009 aaKnown RBP eCLIP17.31■□□□□ 0.36
PRKN-209ENST00000612485 ADAMTSL4Q6UY14 1074 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 ZNF765Q7L2R6 523 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 GPR155Q7Z3F1 870 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 NLRP8Q86W28 1048 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 VSIG1Q86XK7 387 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 RAVER1Q8IY67 606 aaKnown RBP17.31■□□□□ 0.36
PRKN-209ENST00000612485 Q8N9G6 341 aaPredicted RBP17.31■□□□□ 0.36
PRKN-209ENST00000612485 ARRDC2Q8TBH0 407 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.31■□□□□ 0.36
PRKN-209ENST00000612485 PRR11Q96HE9 360 aaPredicted RBP17.31■□□□□ 0.36
PRKN-209ENST00000612485 CHP1Q99653 195 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 MAK16Q9BXY0 300 aaKnown RBP17.31■□□□□ 0.36
PRKN-209ENST00000612485 ABCG8Q9H221 673 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 SUDS3Q9H7L9 328 aaPredicted RBP17.31■□□□□ 0.36
PRKN-209ENST00000612485 PCDH9Q9HC56 1237 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 EPB41L5Q9HCM4 733 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 LRIT1Q9P2V4 623 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 CD84Q9UIB8 345 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 SUFUQ9UMX1 484 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 RPL26L1Q9UNX3 145 aaKnown RBP17.31■□□□□ 0.36
PRKN-209ENST00000612485 CHKBQ9Y259 395 aa17.31■□□□□ 0.36
PRKN-209ENST00000612485 SLC17A4Q9Y2C5 497 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms