RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 HMGCLL1Q8TB92 370 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 ULK4Q96C45 1275 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 SPDL1Q96EA4 605 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 HSPA12BQ96MM6 686 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 SEMA3CQ99985 751 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 NLRC4Q9NPP4 1024 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 STIM2Q9P246 746 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 ANKRD33BA6NCL7 494 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 ENC1O14682 589 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 TERTO14746 1132 aaKnown RBP7.17□□□□□ -1.26
CBWD1-219ENST00000611457 DNAJC6O75061 913 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 CALCAP01258 141 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 RPS3P23396 243 aaKnown RBP eCLIP7.17□□□□□ -1.26
CBWD1-219ENST00000611457 ITPKAP23677 461 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 ACSL1P33121 698 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 HNRNPKP61978 463 aaKnown RBP eCLIP7.17□□□□□ -1.26
CBWD1-219ENST00000611457 PPP2CBP62714 309 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 PPP2CAP67775 309 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 B4GALNT1Q00973 533 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 RPA4Q13156 261 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 MEI1Q5TIA1 1274 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 TSSK4Q6SA08 328 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 CYS1Q717R9 158 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 HDDC3Q8N4P3 179 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 FBXO15Q8NCQ5 510 aaPredicted RBP7.17□□□□□ -1.26
CBWD1-219ENST00000611457 OR8K5Q8NH50 307 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 GLMNQ92990 594 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 CAPZA3Q96KX2 299 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 CCT8L2Q96SF2 557 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 HERPUD2Q9BSE4 406 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 SYTL2Q9HCH5 934 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 IPO11Q9UI26 975 aaKnown RBP7.17□□□□□ -1.26
CBWD1-219ENST00000611457 CYP8B1Q9UNU6 501 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 GOLGA6L10A6NI86 522 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 C2orf81A6NN90 581 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 NUDT21O43809 227 aaKnown RBP7.17□□□□□ -1.26
CBWD1-219ENST00000611457 FAM107AO95990 144 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 FGF1P05230 155 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 MLNP12872 115 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 XRCC1P18887 633 aaPredicted RBP7.17□□□□□ -1.26
CBWD1-219ENST00000611457 TPSB2P20231 275 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 TAS2R40P59535 323 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 UBE2IP63279 158 aaKnown RBP7.17□□□□□ -1.26
CBWD1-219ENST00000611457 WASHC5Q12768 1159 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 TPSAB1Q15661 275 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 CCDC122Q5T0U0 273 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 CFAP58Q5T655 872 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 PNCKQ6P2M8 343 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 KDM7AQ6ZMT4 941 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 FAM131BQ86XD5 332 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 ZSWIM9Q86XI8 627 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 HPS6Q86YV9 775 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 CDKL3Q8IVW4 592 aaPredicted RBP7.17□□□□□ -1.26
CBWD1-219ENST00000611457 LMNTD2Q8IXW0 634 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 CCDC33Q8N5R6 958 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 ARL10Q8N8L6 244 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 HMGB4Q8WW32 186 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 KRT35Q92764 455 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 ITFG2Q969R8 447 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 PAIP2Q9BPZ3 127 aaKnown RBP7.17□□□□□ -1.26
CBWD1-219ENST00000611457 ZPBPQ9BS86 351 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 SLCO3A1Q9UIG8 710 aa7.17□□□□□ -1.26
CBWD1-219ENST00000611457 FPGTO14772 594 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 RPSAP08865 295 aaKnown RBP7.16□□□□□ -1.26
CBWD1-219ENST00000611457 MMP13P45452 471 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 MAPK9P45984 424 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 ATP1A2P50993 1020 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 PCDH1Q08174 1060 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 SPEM2Q0P670 501 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 AASDHQ4L235 1098 aaPredicted RBP7.16□□□□□ -1.26
CBWD1-219ENST00000611457 TEX44Q53QW1 395 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 TRIM61Q5EBN2 209 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 RANBP10Q6VN20 620 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 NLRP9Q7RTR0 991 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 PHC3Q8NDX5 983 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 OR7D4Q8NG98 312 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 CYB5D2Q8WUJ1 264 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 ZNF514Q96K75 400 aaPredicted RBP7.16□□□□□ -1.26
CBWD1-219ENST00000611457 ZSCAN5AQ9BUG6 496 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 ANKMY1Q9P2S6 941 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 SPASTQ9UBP0 616 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 RAPGEFL1Q9UHV5 662 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 A0A0U1RQJ8 604 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 MEI4A8MW99 385 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 TAF4O00268 1085 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 QSOX1O00391 747 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 APOL1O14791 398 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 MUSKO15146 869 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 MFSD11O43934 449 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 ABCB7O75027 752 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 ERGP11308 486 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 PTGER3P43115 390 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 SEMA5AQ13591 1074 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 PDCD2Q16342 344 aaPredicted RBP7.16□□□□□ -1.26
CBWD1-219ENST00000611457 KIF19Q2TAC6 998 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 RAB6CQ53S08 254 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 DCUN1D2Q6PH85 259 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 SYDE1Q6ZW31 735 aaPredicted RBP7.16□□□□□ -1.26
CBWD1-219ENST00000611457 EMC1Q8N766 993 aa7.16□□□□□ -1.26
CBWD1-219ENST00000611457 TRIM58Q8NG06 486 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms