RNA–Protein interactions for RNA: ENST00000610455.4

DEF8-228, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

TSL 1 (best) BASIC

Gene DEF8, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-228ENST00000610455 VIPR1P32241 457 aa17.44■□□□□ 0.38
DEF8-228ENST00000610455 CSF2RBP32927 897 aa17.44■□□□□ 0.38
DEF8-228ENST00000610455 UGT1A3P35503 534 aa17.44■□□□□ 0.38
DEF8-228ENST00000610455 ETV3P41162 512 aa17.44■□□□□ 0.38
DEF8-228ENST00000610455 GPR3P46089 330 aa17.44■□□□□ 0.38
DEF8-228ENST00000610455 POLD2P49005 469 aa17.44■□□□□ 0.38
DEF8-228ENST00000610455 ATP1A2P50993 1020 aa17.44■□□□□ 0.38
DEF8-228ENST00000610455 CTBSQ01459 385 aa17.44■□□□□ 0.38
DEF8-228ENST00000610455 LBRQ14739 615 aaKnown RBP17.44■□□□□ 0.38
DEF8-228ENST00000610455 PTPRRQ15256 657 aa17.44■□□□□ 0.38
DEF8-228ENST00000610455 CLPPQ16740 277 aaPredicted RBP17.44■□□□□ 0.38
DEF8-228ENST00000610455 PPP6R3Q5H9R7 873 aaPredicted RBP17.44■□□□□ 0.38
DEF8-228ENST00000610455 BORAQ6PGQ7 559 aa17.44■□□□□ 0.38
DEF8-228ENST00000610455 CYP4V2Q6ZWL3 525 aaPredicted RBP17.44■□□□□ 0.38
DEF8-228ENST00000610455 PTRH1Q86Y79 214 aaKnown RBP17.44■□□□□ 0.38
DEF8-228ENST00000610455 CBARPQ8N350 705 aaPredicted RBP17.44■□□□□ 0.38
DEF8-228ENST00000610455 IL22RA1Q8N6P7 574 aa17.44■□□□□ 0.38
DEF8-228ENST00000610455 OR4D9Q8NGE8 314 aa17.44■□□□□ 0.38
DEF8-228ENST00000610455 SPOCK2Q92563 424 aa17.44■□□□□ 0.38
DEF8-228ENST00000610455 ART4Q93070 314 aa17.44■□□□□ 0.38
DEF8-228ENST00000610455 DTD2Q96FN9 168 aa17.44■□□□□ 0.38
DEF8-228ENST00000610455 EIF3CQ99613 913 aaKnown RBP17.44■□□□□ 0.38
DEF8-228ENST00000610455 GOLGA6AQ9NYA3 693 aa17.44■□□□□ 0.38
DEF8-228ENST00000610455 TMEM9Q9P0T7 183 aa17.44■□□□□ 0.38
DEF8-228ENST00000610455 SEPT3Q9UH03 358 aa17.44■□□□□ 0.38
DEF8-228ENST00000610455 RELNP78509 3460 aa17.44■□□□□ 0.38
DEF8-228ENST00000610455 ZNF106Q9H2Y7 1883 aaKnown RBP17.44■□□□□ 0.38
DEF8-228ENST00000610455 IGHV1OR21-1A0A087WYE8 117 aa17.43■□□□□ 0.38
DEF8-228ENST00000610455 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.43■□□□□ 0.38
DEF8-228ENST00000610455 TMCO5BA8MYB1 307 aa17.43■□□□□ 0.38
DEF8-228ENST00000610455 ZW10O43264 779 aa17.43■□□□□ 0.38
DEF8-228ENST00000610455 ADCY8P40145 1251 aa17.43■□□□□ 0.38
DEF8-228ENST00000610455 RENBPP51606 427 aa17.43■□□□□ 0.38
DEF8-228ENST00000610455 BIRC2Q13490 618 aa17.43■□□□□ 0.38
DEF8-228ENST00000610455 TRA2AQ13595 282 aaKnown RBP eCLIP17.43■□□□□ 0.38
DEF8-228ENST00000610455 TMCO4Q5TGY1 634 aa17.43■□□□□ 0.38
DEF8-228ENST00000610455 RAET1GQ6H3X3 334 aa17.43■□□□□ 0.38
DEF8-228ENST00000610455 Q6ZVL8 140 aa17.43■□□□□ 0.38
DEF8-228ENST00000610455 PGBD5Q8N414 524 aa17.43■□□□□ 0.38
DEF8-228ENST00000610455 TRIM7Q9C029 511 aa17.43■□□□□ 0.38
DEF8-228ENST00000610455 ADNPQ9H2P0 1102 aa17.43■□□□□ 0.38
DEF8-228ENST00000610455 CWC15Q9P013 229 aaKnown RBP17.43■□□□□ 0.38
DEF8-228ENST00000610455 SLC17A4Q9Y2C5 497 aa17.43■□□□□ 0.38
DEF8-228ENST00000610455 PLEKHM1Q9Y4G2 1056 aa17.43■□□□□ 0.38
DEF8-228ENST00000610455 A0A0U1RQS6 177 aa17.42■□□□□ 0.38
DEF8-228ENST00000610455 NPIPB15A6NHN6 443 aaPredicted RBP17.42■□□□□ 0.38
DEF8-228ENST00000610455 LGALS16A8MUM7 142 aa17.42■□□□□ 0.38
DEF8-228ENST00000610455 SOCS5O75159 536 aa17.42■□□□□ 0.38
DEF8-228ENST00000610455 CPP00450 1065 aa17.42■□□□□ 0.38
DEF8-228ENST00000610455 THRAP10827 490 aa17.42■□□□□ 0.38
DEF8-228ENST00000610455 CR2P20023 1033 aa17.42■□□□□ 0.38
DEF8-228ENST00000610455 MIPP30301 263 aa17.42■□□□□ 0.38
DEF8-228ENST00000610455 POLE2P56282 527 aa17.42■□□□□ 0.38
DEF8-228ENST00000610455 UBXN1Q04323 297 aa17.42■□□□□ 0.38
DEF8-228ENST00000610455 DPYSQ14117 519 aa17.42■□□□□ 0.38
DEF8-228ENST00000610455 PLEKHA7Q6IQ23 1121 aa17.42■□□□□ 0.38
DEF8-228ENST00000610455 DOK6Q6PKX4 331 aa17.42■□□□□ 0.38
DEF8-228ENST00000610455 TSPAN33Q86UF1 283 aa17.42■□□□□ 0.38
DEF8-228ENST00000610455 AGBL5Q8NDL9 886 aa17.42■□□□□ 0.38
DEF8-228ENST00000610455 ZNF564Q8TBZ8 553 aaPredicted RBP17.42■□□□□ 0.38
DEF8-228ENST00000610455 DDA1Q9BW61 102 aa17.42■□□□□ 0.38
DEF8-228ENST00000610455 NOD2Q9HC29 1040 aa17.42■□□□□ 0.38
DEF8-228ENST00000610455 PARVAQ9NVD7 372 aa17.42■□□□□ 0.38
DEF8-228ENST00000610455 OCIAD1Q9NX40 245 aa17.42■□□□□ 0.38
DEF8-228ENST00000610455 KCTD5Q9NXV2 234 aa17.42■□□□□ 0.38
DEF8-228ENST00000610455 SLC39A1Q9NY26 324 aa17.42■□□□□ 0.38
DEF8-228ENST00000610455 GTF3C3Q9Y5Q9 886 aa17.42■□□□□ 0.38
DEF8-228ENST00000610455 PEX11BO96011 259 aa17.41■□□□□ 0.38
DEF8-228ENST00000610455 IVLP07476 585 aa17.41■□□□□ 0.38
DEF8-228ENST00000610455 TNFAIP3P21580 790 aa17.41■□□□□ 0.38
DEF8-228ENST00000610455 CSTF2P33240 577 aaKnown RBP eCLIP17.41■□□□□ 0.38
DEF8-228ENST00000610455 ACTR1BP42025 376 aa17.41■□□□□ 0.38
DEF8-228ENST00000610455 ACTR1AP61163 376 aa17.41■□□□□ 0.38
DEF8-228ENST00000610455 TRAF2Q12933 501 aa17.41■□□□□ 0.38
DEF8-228ENST00000610455 KCNAB2Q13303 367 aa17.41■□□□□ 0.38
DEF8-228ENST00000610455 SQSTM1Q13501 440 aa17.41■□□□□ 0.38
DEF8-228ENST00000610455 ZNF235Q14590 738 aa17.41■□□□□ 0.38
DEF8-228ENST00000610455 RFLNAQ6ZTI6 216 aa17.41■□□□□ 0.38
DEF8-228ENST00000610455 ZNF761Q86XN6 746 aaPredicted RBP17.41■□□□□ 0.38
DEF8-228ENST00000610455 CACNA2D3Q8IZS8 1091 aa17.41■□□□□ 0.38
DEF8-228ENST00000610455 CCDC112Q8NEF3 446 aa17.41■□□□□ 0.38
DEF8-228ENST00000610455 ZNF599Q96NL3 588 aa17.41■□□□□ 0.38
DEF8-228ENST00000610455 ERGIC2Q96RQ1 377 aa17.41■□□□□ 0.38
DEF8-228ENST00000610455 NUDCD1Q96RS6 583 aa17.41■□□□□ 0.38
DEF8-228ENST00000610455 SYT11Q9BT88 431 aa17.41■□□□□ 0.38
DEF8-228ENST00000610455 CDH19Q9H159 772 aa17.41■□□□□ 0.38
DEF8-228ENST00000610455 KCNK4Q9NYG8 393 aa17.41■□□□□ 0.38
DEF8-228ENST00000610455 LIMA1Q9UHB6 759 aaKnown RBP17.41■□□□□ 0.38
DEF8-228ENST00000610455 PHTF1Q9UMS5 762 aa17.41■□□□□ 0.38
DEF8-228ENST00000610455 NBASA2RRP1 2371 aa17.4■□□□□ 0.38
DEF8-228ENST00000610455 A0A1W2PQ67 120 aa17.4■□□□□ 0.38
DEF8-228ENST00000610455 TMEM191CA6NGB0 347 aa17.4■□□□□ 0.38
DEF8-228ENST00000610455 EFCAB7A8K855 629 aa17.4■□□□□ 0.38
DEF8-228ENST00000610455 PRPSAP2O60256 369 aa17.4■□□□□ 0.38
DEF8-228ENST00000610455 RNF8O76064 485 aa17.4■□□□□ 0.38
DEF8-228ENST00000610455 SOD1P00441 154 aa17.4■□□□□ 0.38
DEF8-228ENST00000610455 CYP2A6P11509 494 aaPredicted RBP17.4■□□□□ 0.38
DEF8-228ENST00000610455 HCAR3P49019 387 aa17.4■□□□□ 0.38
DEF8-228ENST00000610455 MAXP61244 160 aa17.4■□□□□ 0.38
DEF8-228ENST00000610455 SKIDA1Q1XH10 827 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms