RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 USP4Q13107 963 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 ARL13AQ5H913 290 aaPredicted RBP11.43□□□□□ -0.58
LINC01278-204ENST00000609143 PITRM1Q5JRX3 1037 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 AARS2Q5JTZ9 985 aaKnown RBP11.43□□□□□ -0.58
LINC01278-204ENST00000609143 MAVSQ7Z434 540 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 PIM3Q86V86 326 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 PARP9Q8IXQ6 854 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 CCNYL1Q8N7R7 359 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 TXNDC5Q8NBS9 432 aaKnown RBP11.43□□□□□ -0.58
LINC01278-204ENST00000609143 ANKRD49Q8WVL7 239 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 LPGAT1Q92604 370 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 GPR63Q9BZJ6 419 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 POMKQ9H5K3 350 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 TDP1Q9NUW8 608 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 EVLQ9UI08 416 aaPredicted RBP11.43□□□□□ -0.58
LINC01278-204ENST00000609143 F8W8V4 182 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 H7C0S8 307 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 ZNF195O14628 629 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 DIAPH2O60879 1101 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 SOCS5O75159 536 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 MOSPD3O75425 235 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 RB1P06400 928 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 CHRNGP07510 517 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 TFEBP19484 476 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 HNRNPH1P31943 449 aaKnown RBP11.43□□□□□ -0.58
LINC01278-204ENST00000609143 SERPINB5P36952 375 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 RPL14P50914 215 aaKnown RBP11.43□□□□□ -0.58
LINC01278-204ENST00000609143 PDAP1Q13442 181 aaKnown RBP11.43□□□□□ -0.58
LINC01278-204ENST00000609143 TUBB3Q13509 450 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 CAMK1DQ8IU85 385 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 HOMEZQ8IX15 550 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 ZNF557Q8N988 423 aaPredicted RBP11.43□□□□□ -0.58
LINC01278-204ENST00000609143 OR6K2Q8NGY2 324 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 ATP13A3Q9H7F0 1226 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 COG4Q9H9E3 785 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 ZMYM5Q9UJ78 669 aa11.43□□□□□ -0.58
LINC01278-204ENST00000609143 INTS6Q9UL03 887 aaKnown RBP11.43□□□□□ -0.58
LINC01278-204ENST00000609143 CAPN14A8MX76 684 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 SLCO1B7G3V0H7 640 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 SRP72O76094 671 aaKnown RBP11.42□□□□□ -0.58
LINC01278-204ENST00000609143 PRSS56P0CW18 603 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 EPCAMP16422 314 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 SYN1P17600 705 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 MPSTP25325 297 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 IRS1P35568 1242 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 TMEM207Q6UWW9 146 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 SLC22A9Q8IVM8 553 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 RYBPQ8N488 228 aaPredicted RBP11.42□□□□□ -0.58
LINC01278-204ENST00000609143 PIH1D2Q8WWB5 315 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 TBC1D10AQ9BXI6 508 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 SYTL2Q9HCH5 934 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 BPIFA1Q9NP55 256 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 TAS2R13Q9NYV9 303 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 DPP7Q9UHL4 492 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 GRM6O15303 877 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 HDAC3O15379 428 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 HTRA2O43464 458 aaPredicted RBP11.42□□□□□ -0.58
LINC01278-204ENST00000609143 CLASP2O75122 1294 aaKnown RBP11.42□□□□□ -0.58
LINC01278-204ENST00000609143 RHOBTB1O94844 696 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 HSPA1AP0DMV8 641 aaKnown RBP11.42□□□□□ -0.58
LINC01278-204ENST00000609143 HSPA1BP0DMV9 641 aaKnown RBP11.42□□□□□ -0.58
LINC01278-204ENST00000609143 ZNF37AP17032 561 aaPredicted RBP11.42□□□□□ -0.58
LINC01278-204ENST00000609143 CTPS1P17812 591 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 SERPINA4P29622 427 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 FMO4P31512 558 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 HMGCLP35914 325 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 SNRPD1P62314 119 aaKnown RBP11.42□□□□□ -0.58
LINC01278-204ENST00000609143 RIPK1Q13546 671 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 SNCBQ16143 134 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 ZRANB3Q5FWF4 1079 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 SEL1L3Q68CR1 1132 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 EPGNQ6UW88 154 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 TRIM67Q6ZTA4 783 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 OR2AP1Q8NGE2 309 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 AGR3Q8TD06 166 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 CNDP1Q96KN2 507 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 LMLNQ96KR4 655 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 CCDC106Q9BWC9 280 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 ALG9Q9H6U8 611 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.42□□□□□ -0.58
LINC01278-204ENST00000609143 IL17CQ9P0M4 197 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 TBC1D14Q9P2M4 693 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 VTI1BQ9UEU0 232 aa11.42□□□□□ -0.58
LINC01278-204ENST00000609143 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.42□□□□□ -0.58
LINC01278-204ENST00000609143 A8MT66 165 aa11.41□□□□□ -0.58
LINC01278-204ENST00000609143 NEDD8-MDP1E9PL57 170 aa11.41□□□□□ -0.58
LINC01278-204ENST00000609143 IPO13O94829 963 aaKnown RBP11.41□□□□□ -0.58
LINC01278-204ENST00000609143 PENKP01210 267 aaPredicted RBP11.41□□□□□ -0.58
LINC01278-204ENST00000609143 HLA-FP30511 346 aa11.41□□□□□ -0.58
LINC01278-204ENST00000609143 SLC5A9Q2M3M2 681 aa11.41□□□□□ -0.58
LINC01278-204ENST00000609143 VWA5B1Q5TIE3 1220 aa11.41□□□□□ -0.58
LINC01278-204ENST00000609143 ELMSAN1Q6PJG2 1045 aa11.41□□□□□ -0.58
LINC01278-204ENST00000609143 LYSMD3Q7Z3D4 306 aa11.41□□□□□ -0.58
LINC01278-204ENST00000609143 TMEM25Q86YD3 366 aa11.41□□□□□ -0.58
LINC01278-204ENST00000609143 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.41□□□□□ -0.58
LINC01278-204ENST00000609143 LBHD1Q9BQE6 289 aaPredicted RBP11.41□□□□□ -0.58
LINC01278-204ENST00000609143 BTBD10Q9BSF8 475 aa11.41□□□□□ -0.58
LINC01278-204ENST00000609143 BBS2Q9BXC9 721 aa11.41□□□□□ -0.58
LINC01278-204ENST00000609143 TNKS2Q9H2K2 1166 aa11.41□□□□□ -0.58
LINC01278-204ENST00000609143 TLE6Q9H808 572 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms