RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 CAPN3P20807 821 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 RPL10P27635 214 aaKnown RBP22.37■■□□□ 1.17
SHANK2-220ENST00000608988 ANKDD1AQ495B1 522 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 KANK2Q63ZY3 851 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 CLEC6AQ6EIG7 209 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 BEND5Q7L4P6 421 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 SPATA19Q7Z5L4 167 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 FAM35AQ86V20 835 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 DCP1BQ8IZD4 617 aaKnown RBP22.37■■□□□ 1.17
SHANK2-220ENST00000608988 SCML4Q8N228 414 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 GPN2Q9H9Y4 310 aaPredicted RBP22.37■■□□□ 1.17
SHANK2-220ENST00000608988 SFMBT1Q9UHJ3 866 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 TLL2Q9Y6L7 1015 aa22.37■■□□□ 1.17
SHANK2-220ENST00000608988 CXCL11O14625 94 aa22.36■■□□□ 1.17
SHANK2-220ENST00000608988 SLC7A4O43246 635 aa22.36■■□□□ 1.17
SHANK2-220ENST00000608988 MAFKO60675 156 aa22.36■■□□□ 1.17
SHANK2-220ENST00000608988 SEC14L2O76054 403 aa22.36■■□□□ 1.17
SHANK2-220ENST00000608988 SEC24DO94855 1032 aaPredicted RBP22.36■■□□□ 1.17
SHANK2-220ENST00000608988 HOXD8P13378 290 aaPredicted RBP22.36■■□□□ 1.17
SHANK2-220ENST00000608988 DARSP14868 501 aaKnown RBP22.36■■□□□ 1.17
SHANK2-220ENST00000608988 SEPT6Q14141 434 aa22.36■■□□□ 1.17
SHANK2-220ENST00000608988 CBX2Q14781 532 aaPredicted RBP22.36■■□□□ 1.17
SHANK2-220ENST00000608988 FSCN1Q16658 493 aaKnown RBP22.36■■□□□ 1.17
SHANK2-220ENST00000608988 FGD3Q5JSP0 725 aa22.36■■□□□ 1.17
SHANK2-220ENST00000608988 BLOC1S3Q6QNY0 202 aa22.36■■□□□ 1.17
SHANK2-220ENST00000608988 ANKRD23Q86SG2 305 aa22.36■■□□□ 1.17
SHANK2-220ENST00000608988 PROSER1Q86XN7 944 aa22.36■■□□□ 1.17
SHANK2-220ENST00000608988 PHYKPLQ8IUZ5 450 aa22.36■■□□□ 1.17
SHANK2-220ENST00000608988 CENPSQ8N2Z9 138 aa22.36■■□□□ 1.17
SHANK2-220ENST00000608988 SFRP1Q8N474 314 aa22.36■■□□□ 1.17
SHANK2-220ENST00000608988 FAM110BQ8TC76 370 aa22.36■■□□□ 1.17
SHANK2-220ENST00000608988 RAB2BQ8WUD1 216 aa22.36■■□□□ 1.17
SHANK2-220ENST00000608988 ACDQ96AP0 544 aa22.36■■□□□ 1.17
SHANK2-220ENST00000608988 TMEM125Q96AQ2 219 aa22.36■■□□□ 1.17
SHANK2-220ENST00000608988 FBXL20Q96IG2 436 aa22.36■■□□□ 1.17
SHANK2-220ENST00000608988 MRGPRX2Q96LB1 330 aa22.36■■□□□ 1.17
SHANK2-220ENST00000608988 C3orf30Q96M34 536 aa22.36■■□□□ 1.17
SHANK2-220ENST00000608988 SMOQ99835 787 aa22.36■■□□□ 1.17
SHANK2-220ENST00000608988 CATSPERBQ9H7T0 1116 aa22.36■■□□□ 1.17
SHANK2-220ENST00000608988 FBRSL1Q9HCM7 1045 aaKnown RBP22.36■■□□□ 1.17
SHANK2-220ENST00000608988 AZIN1O14977 448 aa22.35■■□□□ 1.17
SHANK2-220ENST00000608988 SULT1C4O75897 302 aa22.35■■□□□ 1.17
SHANK2-220ENST00000608988 MBL2P11226 248 aaPredicted RBP22.35■■□□□ 1.17
SHANK2-220ENST00000608988 AKAP5P24588 427 aa22.35■■□□□ 1.17
SHANK2-220ENST00000608988 PLK1P53350 603 aa22.35■■□□□ 1.17
SHANK2-220ENST00000608988 CYP51A1Q16850 503 aa22.35■■□□□ 1.17
SHANK2-220ENST00000608988 OGFOD2Q6N063 350 aa22.35■■□□□ 1.17
SHANK2-220ENST00000608988 FKBP9P1Q75LS8 142 aa22.35■■□□□ 1.17
SHANK2-220ENST00000608988 TMEM86AQ8N2M4 240 aa22.35■■□□□ 1.17
SHANK2-220ENST00000608988 POPDC3Q9HBV1 291 aa22.35■■□□□ 1.17
SHANK2-220ENST00000608988 TXNRD2Q9NNW7 524 aa22.35■■□□□ 1.17
SHANK2-220ENST00000608988 FNIP2Q9P278 1114 aa22.35■■□□□ 1.17
SHANK2-220ENST00000608988 IFT80Q9P2H3 777 aaPredicted RBP22.35■■□□□ 1.17
SHANK2-220ENST00000608988 GMPR2Q9P2T1 348 aaKnown RBP22.35■■□□□ 1.17
SHANK2-220ENST00000608988 NEU3Q9UQ49 428 aa22.35■■□□□ 1.17
SHANK2-220ENST00000608988 FAM149AA5PLN7 773 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 NPPAP01160 153 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 USP17L7P0C7H9 530 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 MAP4P27816 1152 aaKnown RBP22.34■■□□□ 1.17
SHANK2-220ENST00000608988 LHX1P48742 406 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 SOX4Q06945 474 aaPredicted RBP22.34■■□□□ 1.17
SHANK2-220ENST00000608988 FXNQ16595 210 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 VPS26BQ4G0F5 336 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 BROXQ5VW32 411 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 ZNF280DQ6N043 979 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 BHLHA9Q7RTU4 235 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 ISCA2Q86U28 154 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 TWIST2Q8WVJ9 160 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 BDH2Q9BUT1 245 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 MFSD1Q9H3U5 465 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 ATP13A1Q9HD20 1204 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 EGFL7Q9UHF1 273 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 DNAJC15Q9Y5T4 150 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 SNX10Q9Y5X0 201 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 MYLKQ15746 1914 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 DICER1Q9UPY3 1922 aaKnown RBP22.34■■□□□ 1.17
SHANK2-220ENST00000608988 A0A1W2PP18 115 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 GRXCR2A6NFK2 248 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 UBXN8O00124 270 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 BCL10O95999 233 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 OXTRP30559 389 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 GSK3BP49841 420 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 RGS21Q2M5E4 152 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 BRMS1LQ5PSV4 323 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 RBM48Q5RL73 367 aaKnown RBP22.34■■□□□ 1.17
SHANK2-220ENST00000608988 EFL1Q7Z2Z2 1120 aaKnown RBP22.34■■□□□ 1.17
SHANK2-220ENST00000608988 CILP2Q8IUL8 1156 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 ZC3H15Q8WU90 426 aaKnown RBP22.34■■□□□ 1.17
SHANK2-220ENST00000608988 PDGFDQ9GZP0 370 aaPredicted RBP22.34■■□□□ 1.17
SHANK2-220ENST00000608988 ALG9Q9H6U8 611 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 SLC52A3Q9NQ40 469 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 CRTAC1Q9NQ79 661 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 PFDN4Q9NQP4 134 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 ERGIC3Q9Y282 383 aa22.34■■□□□ 1.17
SHANK2-220ENST00000608988 ATP6AP2A0A1C7CYW4 349 aa22.33■■□□□ 1.17
SHANK2-220ENST00000608988 AURKAO14965 403 aa22.33■■□□□ 1.17
SHANK2-220ENST00000608988 INPP4BO15327 924 aa22.33■■□□□ 1.17
SHANK2-220ENST00000608988 PMPCBO75439 489 aa22.33■■□□□ 1.17
SHANK2-220ENST00000608988 ATP6AP2O75787 350 aa22.33■■□□□ 1.17
SHANK2-220ENST00000608988 HLA-DQB2P05538 268 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms