RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 BNC1Q01954 994 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 CD300CQ08708 224 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 BST2Q10589 180 aaKnown RBP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 MERTKQ12866 999 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 ILF2Q12905 390 aaKnown RBP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 TRAF2Q12933 501 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 GPS1Q13098 491 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 TARDBPQ13148 414 aaKnown RBP eCLIP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 CEACAM7Q14002 265 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 FLOT2Q14254 428 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 FASTKD3Q14CZ7 662 aaKnown RBP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 CDK10Q15131 360 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 CHI3L2Q15782 390 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 SHROOM1Q2M3G4 852 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZNF181Q2M3W8 571 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 ANO4Q32M45 955 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 CBWD6Q4V339 395 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 CCDC58Q4VC31 144 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 DCAF17Q5H9S7 520 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 CBWD3Q5JTY5 395 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 CBWD5Q5RIA9 395 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 RBM48Q5RL73 367 aaKnown RBP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 FNBP1LQ5T0N5 605 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 CCNYL2Q5T2Q4 361 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 TMTC4Q5T4D3 741 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 C12orf60Q5U649 245 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 GPR107Q5VW38 600 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 KAZNQ674X7 775 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 MBLAC2Q68D91 279 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 PDPK2PQ6A1A2 396 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 IQSEC1Q6DN90 963 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 PLEKHA7Q6IQ23 1121 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 TTC33Q6PID6 262 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZNF773Q6PK81 442 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 ABRAXAS1Q6UWZ7 409 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 HACD2Q6Y1H2 254 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZBTB49Q6ZSB9 765 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 CDHR3Q6ZTQ4 885 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 TOM1L2Q6ZVM7 507 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 GSTA5Q7RTV2 222 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 PRSS48Q7RTY5 328 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZNF720Q7Z2F6 126 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 HEATR3Q7Z4Q2 680 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 LINC00523Q86TU6 105 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 AKAP14Q86UN6 197 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 STK32CQ86UX6 486 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 RIOX2Q8IUF8 465 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 HERC6Q8IVU3 1022 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 CCDC60Q8IWA6 550 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 DSELQ8IZU8 1212 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 THEMISQ8N1K5 641 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 SFRP1Q8N474 314 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 NATD1Q8N6N6 113 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 LINC00482Q8N8I6 264 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 ASCC1Q8N9N2 400 aaKnown RBP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLC4A11Q8NBS3 891 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 MCUQ8NE86 351 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 FBXO36Q8NEA4 188 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 RHOXF1Q8NHV9 184 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLC7A14Q8TBB6 771 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 PHF10Q8WUB8 498 aaKnown RBP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLC20A1Q8WUM9 679 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 SDR42E1Q8WUS8 393 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 OSCP1Q8WVF1 389 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 ATG4AQ8WYN0 398 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 CPT1BQ92523 772 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 PEX13Q92968 403 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 FKBP10Q96AY3 582 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 CFAP36Q96G28 342 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLC45A3Q96JT2 553 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 CEP19Q96LK0 163 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 FAM20AQ96MK3 541 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZNF778Q96MU6 729 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 VPS35Q96QK1 796 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 TWNKQ96RR1 684 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 CDRT15Q96T59 188 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLC29A1Q99808 456 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 GDF15Q99988 308 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 TMEM47Q9BQJ4 181 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 EBF4Q9BQW3 602 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 TMEM121Q9BTD3 319 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 MRIQ9BWK5 157 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 C1QTNF3Q9BXJ4 246 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 B3GNT4Q9C0J1 378 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 C20orf27Q9GZN8 174 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 RAD21L1Q9H4I0 556 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZHX3Q9H4I2 956 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 GREM2Q9H772 168 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 ACAD9Q9H845 621 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 NEK6Q9HC98 313 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 XAB2Q9HCS7 855 aaKnown RBP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 TM9SF3Q9HD45 589 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 CCDC177Q9NQR7 707 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 NECTIN3Q9NQS3 549 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 SACM1LQ9NTJ5 587 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 PAK1IP1Q9NWT1 392 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 DDX56Q9NY93 547 aaKnown RBP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 PKD2L2Q9NZM6 624 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 CGGBP1Q9UFW8 167 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 CD300AQ9UGN4 299 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms