RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 ANKRD11Q6UB99 2663 aaPredicted RBP16.35■□□□□ 0.21
TUBE1-206ENST00000603722 A0A1W2PNU3 283 aaPredicted RBP16.34■□□□□ 0.21
TUBE1-206ENST00000603722 CAPN8A6NHC0 703 aa16.34■□□□□ 0.21
TUBE1-206ENST00000603722 C3orf70A6NLC5 250 aaPredicted RBP16.34■□□□□ 0.21
TUBE1-206ENST00000603722 ZNF487B1APH4 448 aa16.34■□□□□ 0.21
TUBE1-206ENST00000603722 APOL1O14791 398 aa16.34■□□□□ 0.21
TUBE1-206ENST00000603722 JCHAINP01591 159 aa16.34■□□□□ 0.21
TUBE1-206ENST00000603722 RPLP0P05388 317 aaKnown RBP16.34■□□□□ 0.21
TUBE1-206ENST00000603722 CEACAM5P06731 702 aa16.34■□□□□ 0.21
TUBE1-206ENST00000603722 HOXB3P14651 431 aaPredicted RBP16.34■□□□□ 0.21
TUBE1-206ENST00000603722 CES1P23141 567 aa16.34■□□□□ 0.21
TUBE1-206ENST00000603722 GPR1P46091 355 aa16.34■□□□□ 0.21
TUBE1-206ENST00000603722 GNPDA1P46926 289 aa16.34■□□□□ 0.21
TUBE1-206ENST00000603722 CCDC173Q0VFZ6 552 aa16.34■□□□□ 0.21
TUBE1-206ENST00000603722 ZBTB17Q13105 803 aa16.34■□□□□ 0.21
TUBE1-206ENST00000603722 TBX2Q13207 712 aaPredicted RBP16.34■□□□□ 0.21
TUBE1-206ENST00000603722 ODF2Q5BJF6 829 aa16.34■□□□□ 0.21
TUBE1-206ENST00000603722 FAM182AQ5T1J6 154 aa16.34■□□□□ 0.21
TUBE1-206ENST00000603722 SLC9A4Q6AI14 798 aa16.34■□□□□ 0.21
TUBE1-206ENST00000603722 DOK6Q6PKX4 331 aa16.34■□□□□ 0.21
TUBE1-206ENST00000603722 TECPR1Q7Z6L1 1165 aa16.34■□□□□ 0.21
TUBE1-206ENST00000603722 LSMEM2Q8N112 164 aa16.34■□□□□ 0.21
TUBE1-206ENST00000603722 PTCD2Q8WV60 388 aaKnown RBP16.34■□□□□ 0.21
TUBE1-206ENST00000603722 AP2M1Q96CW1 435 aa16.34■□□□□ 0.21
TUBE1-206ENST00000603722 NAF1Q96HR8 494 aaKnown RBP16.34■□□□□ 0.21
TUBE1-206ENST00000603722 ZNF578Q96N58 590 aaPredicted RBP16.34■□□□□ 0.21
TUBE1-206ENST00000603722 MAK16Q9BXY0 300 aaKnown RBP16.34■□□□□ 0.21
TUBE1-206ENST00000603722 CEP41Q9BYV8 373 aa16.34■□□□□ 0.21
TUBE1-206ENST00000603722 FRMD8Q9BZ67 464 aaPredicted RBP16.34■□□□□ 0.21
TUBE1-206ENST00000603722 DPEP2Q9H4A9 486 aa16.34■□□□□ 0.21
TUBE1-206ENST00000603722 PCDH9Q9HC56 1237 aa16.34■□□□□ 0.21
TUBE1-206ENST00000603722 SUFUQ9UMX1 484 aa16.34■□□□□ 0.21
TUBE1-206ENST00000603722 LOC400499M0QZD8 3231 aa16.34■□□□□ 0.21
TUBE1-206ENST00000603722 ARID1BQ8NFD5 2236 aaPredicted RBP16.33■□□□□ 0.2
TUBE1-206ENST00000603722 APC2O95996 2303 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 PMS2P1A4D2B8 440 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 NTN3O00634 580 aaPredicted RBP16.33■□□□□ 0.2
TUBE1-206ENST00000603722 NOBOXO60393 691 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 DXOO77932 396 aaKnown RBP16.33■□□□□ 0.2
TUBE1-206ENST00000603722 SOD1P00441 154 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 PRLP01236 227 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 ZNF30P17039 623 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 TEAD1P28347 426 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 CD86P42081 329 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 POLD2P49005 469 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 PCBP4P57723 403 aaKnown RBP16.33■□□□□ 0.2
TUBE1-206ENST00000603722 DYNLT1P63172 113 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 PTSQ03393 145 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 DPTQ07507 201 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 PPIDQ08752 370 aaKnown RBP16.33■□□□□ 0.2
TUBE1-206ENST00000603722 AP1B1Q10567 949 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 C14orf28Q4W4Y0 310 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 FOXR1Q6PIV2 292 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 SARM1Q6SZW1 724 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 NPNTQ6UXI9 565 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 RFX6Q8HWS3 928 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 Q8N9G6 341 aaPredicted RBP16.33■□□□□ 0.2
TUBE1-206ENST00000603722 OR6C4Q8NGE1 309 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 SCAMP4Q969E2 229 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 RNF25Q96BH1 459 aaPredicted RBP16.33■□□□□ 0.2
TUBE1-206ENST00000603722 GRAMD1AQ96CP6 724 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 ANP32EQ9BTT0 268 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 ABCG8Q9H221 673 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 DNPEPQ9ULA0 475 aa16.33■□□□□ 0.2
TUBE1-206ENST00000603722 D6RAR5 112 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 SPOPO43791 374 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 FUCA1P04066 466 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 MMP2P08253 660 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 GLB1P16278 677 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 COMTP21964 271 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 SLC1A1P43005 524 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 STC1P52823 247 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 RPL26P61254 145 aaKnown RBP16.32■□□□□ 0.2
TUBE1-206ENST00000603722 CCL7P80098 99 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 IFI35P80217 286 aaPredicted RBP16.32■□□□□ 0.2
TUBE1-206ENST00000603722 SKOR1P84550 965 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 ILF3Q12906 894 aaKnown RBP eCLIP16.32■□□□□ 0.2
TUBE1-206ENST00000603722 HLTFQ14527 1009 aaKnown RBP eCLIP16.32■□□□□ 0.2
TUBE1-206ENST00000603722 CERCAMQ5T4B2 595 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 LRRC38Q5VT99 294 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 OGFOD3Q6PK18 319 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 ADAMTSL4Q6UY14 1074 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 B3GNT8Q7Z7M8 397 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 TRIM74Q86UV6 250 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 VSIG1Q86XK7 387 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 NRROSQ86YC3 692 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 CCNJLQ8IV13 435 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 RHOT1Q8IXI2 618 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 CNTD1Q8N815 330 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 ZNF248Q8NDW4 579 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 KIAA1524Q8TCG1 905 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 GPBAR1Q8TDU6 330 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 HIC2Q96JB3 615 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 GFM1Q96RP9 751 aaKnown RBP16.32■□□□□ 0.2
TUBE1-206ENST00000603722 AGAP2Q99490 1192 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 TRIM5Q9C035 493 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 ASCL3Q9NQ33 180 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 THSD1Q9NS62 852 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 SEPT10Q9P0V9 454 aa16.32■□□□□ 0.2
TUBE1-206ENST00000603722 INTUQ9ULD6 942 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms