RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 H2AFVQ71UI9 128 aa21.2■□□□□ 0.98
PPFIA3-209ENST00000602783 JAMLQ86YT9 394 aa21.2■□□□□ 0.98
PPFIA3-209ENST00000602783 OR8K1Q8NGG5 319 aa21.2■□□□□ 0.98
PPFIA3-209ENST00000602783 NSMCE1Q8WV22 266 aa21.2■□□□□ 0.98
PPFIA3-209ENST00000602783 SNRNP27Q8WVK2 155 aaKnown RBP21.2■□□□□ 0.98
PPFIA3-209ENST00000602783 WBP1Q96G27 269 aa21.2■□□□□ 0.98
PPFIA3-209ENST00000602783 CARS2Q9HA77 564 aaKnown RBP21.2■□□□□ 0.98
PPFIA3-209ENST00000602783 KCTD5Q9NXV2 234 aa21.2■□□□□ 0.98
PPFIA3-209ENST00000602783 PHTF1Q9UMS5 762 aa21.2■□□□□ 0.98
PPFIA3-209ENST00000602783 RNF215Q9Y6U7 377 aa21.2■□□□□ 0.98
PPFIA3-209ENST00000602783 ARHGEF17Q96PE2 2063 aaPredicted RBP21.2■□□□□ 0.98
PPFIA3-209ENST00000602783 K7ENP7 123 aa21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 AGRPO00253 132 aa21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 HEXIM1O94992 359 aaKnown RBP21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 CYP2A6P11509 494 aaPredicted RBP21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 MYCLP1P12525 358 aaPredicted RBP21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 PNLIPP16233 465 aa21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 NFKBIAP25963 317 aa21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 CCKBRP32239 447 aa21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 ETV3P41162 512 aa21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 MMP13P45452 471 aa21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 TAS2R40P59535 323 aa21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 HLTFQ14527 1009 aaKnown RBP eCLIP21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 TSR1Q2NL82 804 aaKnown RBP21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 MARC1Q5VT66 337 aa21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 NCBP2-AS2Q69YL0 99 aa21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 INO80CQ6PI98 192 aaPredicted RBP21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 CCDC81Q6ZN84 652 aa21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 ZNF605Q86T29 641 aa21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 VSTM4Q8IW00 320 aa21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 CBARPQ8N350 705 aaPredicted RBP21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 RNF214Q8ND24 703 aa21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 PHPT1Q9NRX4 125 aaPredicted RBP21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 ABHD10Q9NUJ1 306 aa21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 PCDHGA7Q9Y5G6 932 aa21.19■□□□□ 0.98
PPFIA3-209ENST00000602783 AHCTF1Q8WYP5 2266 aa21.18■□□□□ 0.98
PPFIA3-209ENST00000602783 SSU72P8A0A1W2PR75 194 aa21.18■□□□□ 0.98
PPFIA3-209ENST00000602783 JMJD7P0C870 316 aa21.18■□□□□ 0.98
PPFIA3-209ENST00000602783 PTPRRQ15256 657 aa21.18■□□□□ 0.98
PPFIA3-209ENST00000602783 HSD11B1LQ7Z5J1 315 aa21.18■□□□□ 0.98
PPFIA3-209ENST00000602783 SPRED1Q7Z699 444 aa21.18■□□□□ 0.98
PPFIA3-209ENST00000602783 HEATR4Q86WZ0 1026 aa21.18■□□□□ 0.98
PPFIA3-209ENST00000602783 DTD2Q96FN9 168 aa21.18■□□□□ 0.98
PPFIA3-209ENST00000602783 ZNF670Q9BS34 389 aa21.18■□□□□ 0.98
PPFIA3-209ENST00000602783 TEX101Q9BY14 249 aa21.18■□□□□ 0.98
PPFIA3-209ENST00000602783 SPATS2LQ9NUQ6 558 aaKnown RBP21.18■□□□□ 0.98
PPFIA3-209ENST00000602783 ZNHIT6Q9NWK9 470 aaKnown RBP21.18■□□□□ 0.98
PPFIA3-209ENST00000602783 PISDQ9UG56 409 aa21.18■□□□□ 0.98
PPFIA3-209ENST00000602783 GOLGA6CA6NDK9 693 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 GOLGA6BA6NDN3 693 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 NUDT21O43809 227 aaKnown RBP21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 AKR1B10O60218 316 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 MFAP3LO75121 409 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 MAP3K6O95382 1288 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 FUCA1P04066 466 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 CEACAM5P06731 702 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 TPM1P09493 284 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 TMEM253P0C7T8 217 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 GOLGA6DP0CG33 693 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 CCNB1P14635 433 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 LHCGRP22888 699 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 ZFP36L1Q07352 338 aaKnown RBP21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 PAFAH1B3Q15102 231 aaKnown RBP21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 ANKRD20A8PQ5CZ79 823 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 RALGPS1Q5JS13 557 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 KIAA1614Q5VZ46 1190 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 Q6ZVL8 140 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 NRROSQ86YC3 692 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 KCTD6Q8NC69 237 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 KIAA1524Q8TCG1 905 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 GPBAR1Q8TDU6 330 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 TTC9Q92623 222 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 SCRN2Q96FV2 425 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 CCNL2Q96S94 520 aaPredicted RBP21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 NT5MQ9NPB1 228 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 GOLGA6AQ9NYA3 693 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 LCMT1Q9UIC8 334 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 LOXL2Q9Y4K0 774 aa21.17■□□□□ 0.98
PPFIA3-209ENST00000602783 CAPN8A6NHC0 703 aa21.16■□□□□ 0.98
PPFIA3-209ENST00000602783 NPIPB15A6NHN6 443 aaPredicted RBP21.16■□□□□ 0.98
PPFIA3-209ENST00000602783 PGLSO95336 258 aa21.16■□□□□ 0.98
PPFIA3-209ENST00000602783 CTPS1P17812 591 aa21.16■□□□□ 0.98
PPFIA3-209ENST00000602783 MAN1A1P33908 653 aa21.16■□□□□ 0.98
PPFIA3-209ENST00000602783 GARSP41250 739 aaKnown RBP21.16■□□□□ 0.98
PPFIA3-209ENST00000602783 CDK3Q00526 305 aa21.16■□□□□ 0.98
PPFIA3-209ENST00000602783 GALNT2Q10471 571 aa21.16■□□□□ 0.98
PPFIA3-209ENST00000602783 ILF3Q12906 894 aaKnown RBP eCLIP21.16■□□□□ 0.98
PPFIA3-209ENST00000602783 LY6DQ14210 128 aa21.16■□□□□ 0.98
PPFIA3-209ENST00000602783 PDK2Q15119 407 aa21.16■□□□□ 0.98
PPFIA3-209ENST00000602783 ARMC12Q5T9G4 340 aa21.16■□□□□ 0.98
PPFIA3-209ENST00000602783 RAET1GQ6H3X3 334 aa21.16■□□□□ 0.98
PPFIA3-209ENST00000602783 TSPAN33Q86UF1 283 aa21.16■□□□□ 0.98
PPFIA3-209ENST00000602783 ZDHHC1Q8WTX9 485 aa21.16■□□□□ 0.98
PPFIA3-209ENST00000602783 CHP1Q99653 195 aa21.16■□□□□ 0.98
PPFIA3-209ENST00000602783 GSDMCQ9BYG8 508 aa21.16■□□□□ 0.98
PPFIA3-209ENST00000602783 FRMD8Q9BZ67 464 aaPredicted RBP21.16■□□□□ 0.98
PPFIA3-209ENST00000602783 SPTLC3Q9NUV7 552 aa21.16■□□□□ 0.98
PPFIA3-209ENST00000602783 CFAP46Q8IYW2 2715 aa21.15■□□□□ 0.98
PPFIA3-209ENST00000602783 ZNF462Q96JM2 2506 aa21.15■□□□□ 0.98
PPFIA3-209ENST00000602783 A0A0U1RQS6 177 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms